| Tag | Content |
|---|
EnhancerAtlas ID | HS130-11985 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr18:42313200-42314280 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| HNF1A | MA0046.2 | chr18:42313228-42313243 | AGTAAATAATTAATT | - | 6.47 | | HNF1B | MA0153.2 | chr18:42313229-42313242 | GTAAATAATTAAT | + | 6.42 | | LMX1B | MA0703.2 | chr18:42314249-42314260 | TTAATTAAATT | - | 6.32 | | Lhx3 | MA0135.1 | chr18:42313231-42313244 | AAATAATTAATTT | - | 6.78 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_26019 | chr18:42311370-42314357 | Duodenum_Smooth_Muscle | | SE_58983 | chr18:42279370-42342825 | Ly3 | | SE_61046 | chr18:42288927-42388206 | HBL1 | | SE_63146 | chr18:42288905-42342704 | Tonsil |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH18I044729 | chr18 | 42309084 | 42314364 |
|
Enhancer Sequence | CTGACATGGC CAAGCTGAAT CTCTGGTAAG TAAATAATTA ATTTGGAAGT TGGGGATGTC 60
AGTGGAAAAG TCGGCTCTGA CGGCTCAAAT AACAAGCCCC AAATGTGATA GCCACTCTCT 120
GGCCCTTTGA GAGACGACCT GTCGGTTCTA TTAGATCTGG ACAGTCCTGT CTTCCGGCCT 180
GTCTCTCCAC ATTAAAGTCA AGGAACTGTA TCTCTCCATC TTTGGATCAC ATCTCTGTCC 240
CCAAATGCTT GTGCACACTG TGGAGTCTGG TGTTTTCTTT CCTAACTCCA CCAGGCCCAT 300
GCAAGTCCAC ATGACTCATG AGAAGAGATG AGTCGCAGCT CCAGTATCCC TGTGGGTTTG 360
GGGAGGGGTC AGGCTGTGAA TAAACCACTA CGTGGCTGAT TTTACATCCT TCTCTTTCAC 420
CACAAAAACC TCAATTTCCC TTTTTGTGGA AAACAAAAAC CCTCTTTCAG TGTTCCATCA 480
AGGGGACTGT GGCCTTTGAA TTGCACGGTG TCCCTGAGAA ATTTTAAAGA TTAATCAGCT 540
TTTTTGGGGA GTGGCTGGGA GAGGCCCTAT TCCTGTCCAT TAGGGAGTAG CAGGTCTCCC 600
CTTCTGTTCC TTCTGACCAG GCTGCCATCT TCATGTGTAG ATGAGGAAAT TGATCAGCCT 660
ATGAATGATT TGCAAATCCA CAGATGTGTG GCTGAGACCC TGAGGGCATT CATCACAGGA 720
TCTGCCCGGT CCAAAAGTTC CCTTCTCCCA TCACAATTCA GGGCCTTCAC AGAGCTGGGG 780
GAGTGAGTAA TGATGGGGGC AAAAGTCACA CACTGAAGCA AATGAGGACA AGCCCTGAAA 840
ATCAGACCCT GTTGAGGCCT GGTCCAGGGG CTTTCTAGTA CACTAGTTGA GATCATTTCT 900
AAAAGGAAAT AACAGAATAA AATCTCAGAT AGGCAGTATA AGAATTTGTA AATGGTAAAT 960
GTGCTATAAG GGTGAGTAAG ATGCATTGCT TATTGCTTGA GAGGATTTCT TTGCCCTTCA 1020
GTGTATCTGG ATTTGTCATT CATGAGCTAT TAATTAAATT CGTACTCTCT GCTAGTATTC 1080
|
