| Tag | Content |
|---|
EnhancerAtlas ID | HS130-10471 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr17:1986950-1988500 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RARA(var.2) | MA0730.1 | chr17:1987079-1987096 | AGGTCAAAAGAGGGTCA | + | 6.72 |
|
| | Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
| SE_01061 | chr17:1986554-1989308 | Adrenal_Gland | | SE_02909 | chr17:1986593-1989575 | Bladder | | SE_23606 | chr17:1985655-1990314 | Colon_Crypt_1 | | SE_24228 | chr17:1986234-1989487 | Colon_Crypt_2 | | SE_26036 | chr17:1984988-1995011 | Duodenum_Smooth_Muscle | | SE_27947 | chr17:1984780-1990253 | Fetal_Intestine | | SE_29008 | chr17:1984698-1995117 | Fetal_Intestine_Large | | SE_29663 | chr17:1985542-1995116 | Fetal_Muscle | | SE_31637 | chr17:1986266-1993476 | Gastric | | SE_37224 | chr17:1983750-1990253 | HSMMtube | | SE_38267 | chr17:1986514-1995364 | HUVEC | | SE_39020 | chr17:1986734-1989966 | IMR90 | | SE_44384 | chr17:1986306-1989997 | NHDF-Ad | | SE_44866 | chr17:1986744-1989596 | NHLF | | SE_45863 | chr17:1986612-1990255 | Osteoblasts | | SE_46751 | chr17:1986825-1988456 | Ovary | | SE_48641 | chr17:1986214-1994020 | Right_Atrium | | SE_50033 | chr17:1986534-1988318 | RPMI-8402 | | SE_50098 | chr17:1984234-1995157 | Sigmoid_Colon | | SE_51506 | chr17:1985665-1994989 | Skeletal_Muscle | | SE_51849 | chr17:1984177-1988515 | Skeletal_Muscle_Myoblast | | SE_52360 | chr17:1984170-1995148 | Small_Intestine | | SE_53621 | chr17:1984778-1994970 | Spleen | | SE_59787 | chr17:1984479-2005681 | Ly4 | | SE_63628 | chr17:1984163-1988579 | HSMM |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | TTCATGAGGT TAACCCAGAC TGCAGTGAGC GGGACAGAAT GCCTGCCTAG CCCATGGGGG 60
AACACTGCCT CTGCCTGCTC TGACTAGGGA TATACAAGGT TATCACGGGG CTTGAAGTGA 120
GCTTGACTGA GGTCAAAAGA GGGTCAGAGA AGCTTGTCTG AGGTTGGCTC AGCTCTCACA 180
GTAAACGAGG AAGTGCAAGG TTATGAAATT ACACAGACCA GGGTAAGCAC AGTTTCCCAG 240
AGGCCACTAA CATGAAGGAA CCCAGGAGAC TCGTGGGAAA AGGAAGAAGT GGGCAGCCTG 300
GTGTGGGTCA CAACCTTTGT CTGGTCAATA AGCCTTAGAA CGAGAAAAAA AAGTGTGGCA 360
CTACCAAGAT CCGGGACCAG AGAAGTCATC TGTTCCTTGT GAGGGCAGAG AAGGCCTTCT 420
CTGGCTTTGG TGCTGTGGCC CTCTCTGGGC CTCACTTGCC TCACTGGATT TGGGACTGCA 480
GGCTCCCCTG GCCACAGGGC ATCTTTGGGC AAGCCTGGGA GCTAACCTGG CTGTGCCCTC 540
AGCCTGAAAG TGCGGGTGAA AGAGCTGACG GAGGCACTGC TCCACCTGTG CTTCCCCACA 600
CAGTACCCAG GGCTTGGGTG GCACTGCTCT GCCCTGCCTG AAGCCTGGAT GCCCTGCCAG 660
CTTTAGCAAG CCTGCTGTCC CCTCCCATGC TAACAGCTCA TTCTTTCCCA TTATTCTCTG 720
CCCAGGTTTC ATCTGGAGAG TCTGGAATCC TAGGCTCAGC TTTATCCCTG GAACCACCTC 780
TGTCCTGGAA GCTGAGCCCT ATGTCATCAG GGGTGGGGTG GGGCTCTCCA GTTATTCTAA 840
TGAAGCCAGT CCAAGACTCT GCTGCTCTCA GGACTCTGAT CCAAAGGTGG CCACTCTATC 900
ACTGTTTCAG ATCACAAACG ACAGCTTCCA GCTGACATCT GGCTTCCTTG GCCTGTTGCT 960
GACTTCATCC CTGTACCCCG CCCTGCTCTA CCGGGCGCTT GAGACTGCTG CAGGCCAAAT 1020
GACTGTGTTG GCCTATGGGT GACCTGGCCC CTGGCTAGAA TCGCTTCCGT CCCTTCCCTT 1080
AGTCCCATGT TCCTTCCCAC CTAAGTCTCT TGTCTTTAAC ACTGTGGGGT AAAAAGAAGA 1140
GTCAACCTTC AGGTAAAAGT GAGGTGTGTG TGAACACACA TCCAGACAGA AATACCCACA 1200
CCCAGACACA CAGCAGGGCA GCTGGAAGTG ATACTAAATG CATACATGCT CCAACAACAT 1260
CACACTCACA ACCACTCAGA ACCCACAGAG AGCAGGGAAG CTGGCAGCAG TGTTTACTTA 1320
AACTGACACA CAAACCCAGC ACACACAGAC CCACATCAAC AATCACTCCC AGAAAGACAC 1380
AAATAGGCAA TGGCAATATA TAGGGCAGGG CAACTGCCAG TGGACTATTG CAGGGGCGGG 1440
TACACAGGCT CATGCATGTG CATGCGCGTG CGCACACACA CACACAGACG CGCACACACA 1500
CACACAGACA CACACACACG AGTCTGGAGT GAAGCAAGGG CTACAGGAAC 1550
|
