Tag | Content |
---|
EnhancerAtlas ID | HS130-02997 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr1:235146960-235148730 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RREB1 | MA0073.1 | chr1:235147328-235147348 | CCCCCACACACACCCACGCC | + | 6.07 | ZNF263 | MA0528.1 | chr1:235147070-235147091 | TTTTCCTCTCTCACCTCCCCC | - | 6.41 |
|
| Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
SE_02305 | chr1:235147035-235148901 | Astrocytes | SE_06052 | chr1:235147258-235149727 | Brain_Hippocampus_Middle | SE_25800 | chr1:235146945-235149402 | Duodenum_Smooth_Muscle | SE_26806 | chr1:235147079-235148893 | Esophagus | SE_29689 | chr1:235147728-235149217 | Fetal_Muscle | SE_31235 | chr1:235146510-235149391 | Fetal_Thymus | SE_32614 | chr1:235140175-235154143 | GM12878 | SE_33758 | chr1:235147075-235148879 | HCC1954 | SE_34767 | chr1:235147005-235148891 | HeLa | SE_36058 | chr1:235146614-235149471 | HMEC | SE_36952 | chr1:235146938-235152568 | HSMMtube | SE_37966 | chr1:235146872-235149155 | HUVEC | SE_40653 | chr1:235147027-235149414 | Left_Ventricle | SE_42265 | chr1:235147105-235148992 | Lung | SE_44202 | chr1:235146927-235148930 | NHDF-Ad | SE_45558 | chr1:235146593-235149758 | Osteoblasts | SE_47119 | chr1:235148155-235149767 | Panc1 | SE_50071 | chr1:235146899-235149198 | Sigmoid_Colon | SE_51271 | chr1:235147542-235149156 | Skeletal_Muscle | SE_52352 | chr1:235147001-235149055 | Small_Intestine | SE_53330 | chr1:235146848-235149167 | Spleen | SE_56068 | chr1:235146597-235149251 | u87 | SE_57395 | chr1:235146972-235147669 | VACO_503 | SE_59274 | chr1:235138265-235187641 | Ly3 | SE_60969 | chr1:235059965-235155853 | HBL1 | SE_62329 | chr1:235047040-235185428 | Tonsil | SE_63542 | chr1:235146861-235147654 | HSMM | SE_63542 | chr1:235147688-235148831 | HSMM | SE_65393 | chr1:235146807-235149156 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I235010 | chr1 | 235145789 | 235150146 |
|
Enhancer Sequence | CCCAAACCAG AAAGACTGTG GGTTCCTTGC ATCAAGCCGG GGCTTTTAGT CAACTCTCCC 60 ATGGGGACTC TGTTGGCCCG CTCCACCTCG GGTGTTCCCC CGCCCCTGCC TTTTCCTCTC 120 TCACCTCCCC CATCCACCCC TCTCAGCCTT GCAGTCGACC TGCCTCTCCT CTGGTTGCTC 180 CGTTTGTAGG GAGGGTCTGC TTGAAGGGAG TTCCCATTCT CTCTCACCCA GAGTCAAGGC 240 TCTTGACTCT ATTGTACCTA AAAAGCTCCT GAGGAATTTG ACAAGGCCCC ACCCTCAGAG 300 ATATGGGGTG AAGCCCAGGA ATCTGTATTT TTAACAAGCA TCCCAGGTGA TCCTGATACT 360 TGCACACACC CCCACACACA CCCACGCCGA CTACCCACAC ACTTCCATGG CCCAGAAGTC 420 TGCAGGACCC ACAGCAGGTA TTCGGGACTA TTTGTTCAAT CCACACCTGA GTCGTTGCAC 480 GATTATGCTC AAGTCCCTCG GAACACCTCG CCTGCCATCT GACAGCTTCC CATCCAGAAA 540 CCACACAGTA CAGTAAAAAA CAGAAAAAAG AAAGCCGTTA GACCCCAGTG AATGTTATTT 600 TTAATGAAAG TGGTGCATTT TGACTCACAA TGTTGAAACC AGATTATAAA TGAGTCATCA 660 GTGAATCGAC CACAAAGAGC CTTTGCGGAG GTGATTTACA GGAGAGCTCT GATGTCTGCT 720 GTCCCCTGCA CACGCTTCAC AGAGATGCTG TCAGACGCAG AGCTGGTCTG GGGCATCTGT 780 TGCCGCGTCA GCTCAAAAGG ATGCTGTGTT GTCACCAATG GGATTCCCCA GCCCAGGCGG 840 TGTTGCGGTC CCACCCACAC AAGGAAGGCG GCCATCACTG AATAATGCTT GTGGTTACAT 900 CATCATTGCT GGTTTCCAGG TAGTGACTAG CAGATACTGG AGAGAGACAG GCCATCTGCT 960 CTTCCTGTGC GCCTCAGCTC CTCCCTCATA CCCACATCCT CTCGCCTGGT CTTCTAGAAG 1020 CAGCCCCTAT GCAGACAGAC CAGCAGGACT GAAAGCTGGA CAGACTCGAG CCGGAGAGCC 1080 AGGTGGAACA ACCTGGCCAG AAAGAGTCTG GCCGCAAAGA GTCTGGCCAC AGCCCCACTT 1140 TCCTCATCTC TAAAATGTCC ACATGGCTGC CTGCCCTGCC CGGCTCAAGG GAATGTTGCA 1200 AGGCTCTCAT GGAAACCATG CTTGTGAGGG TTTTGAGGAC TATCATAGCC CGTCCCAAGG 1260 TCAGAGGACA GTAGAAAACA AAAAACTTGC TTTCAGAGGG TGCTTTCACC AGTCAGCAGC 1320 CTCTGCCCCG GGCAAAGCCA GACAACTAAA ACGGAATGAA TCCGCAGAGT AGGGTGGGGA 1380 TGAAATTCTC CACCTCCAAC CCAGAAAGGA AACGCCAATG CTCATGTTTC CCCTTAGAGA 1440 AACAGGCAAT GTTTGAACAG GAACAACGAC GCCAGAGGGT CAATCCACAC ACAGAACACT 1500 CCATCTCCAT GCCGATGGGG GACTGACTGT CCTGCTGCTG AACTGCACCC CTGGGGCTCT 1560 CCAGGACACT CCACTGGTGG CCACACTCAG GAAAATAAAG AAAAACCTTC AAAAGGACCC 1620 TTCTGGCCAT TCAGAGAATG CACAGGCCTG CTAGCTCCTG CTTGCCTGCT CAGAGCTGCC 1680 TCCACTGGGG CAGGAATCTG CAGCCAAGAA AATCCCTGAC AACCCCAGGG ACAGAAGGGT 1740 CAGTCTGGGG GACCATCGAC CAACCCAGCA 1770
|