EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS130-02479

Organism

Homo sapiens

Tissue/cell

MDA-MB-231

Coordinate

chr1:201519800-201523330

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SPI1

MA0080.4

chr1:201523158-201523172

AACTTCCCCATTTC

6.13

dbSUPER

Number of super-enhancer constituents: 19
ID	Coordinate	Tissue/cell

SE_02662	chr1:201520519-201523848	Astrocytes
SE_03518	chr1:201520682-201522728	Brain_Angular_Gyrus
SE_03518	chr1:201522955-201523792	Brain_Angular_Gyrus
SE_04409	chr1:201519619-201524045	Brain_Anterior_Caudate
SE_05175	chr1:201519473-201524802	Brain_Cingulate_Gyrus
SE_06157	chr1:201519646-201524543	Brain_Hippocampus_Middle
SE_07280	chr1:201519685-201524274	Brain_Hippocampus_Middle_150
SE_08097	chr1:201519677-201524489	Brain_Inferior_Temporal_Lobe
SE_37083	chr1:201520031-201524729	HSMMtube
SE_44518	chr1:201519697-201524285	NHDF-Ad
SE_45347	chr1:201521075-201521626	NHLF
SE_45347	chr1:201522324-201522965	NHLF
SE_45633	chr1:201519539-201527734	Osteoblasts
SE_52112	chr1:201520520-201523902	Skeletal_Muscle_Myoblast
SE_56031	chr1:201519792-201523361	u87
SE_63919	chr1:201520506-201524038	HSMM
SE_65852	chr1:201520853-201522775	Pancreatic_islets
SE_67744	chr1:201519792-201523361	u87
SE_67991	chr1:201468991-201535915	TC32

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I201550

chr1

201519938

201524528

Enhancer Sequence

TTATAGATGT TTGATTAAAT CTTGATTAAC TTCAATTTTG TAGTTTTATG TTTGTATTTG 60
GGAACCCAGG GCCTCTGAAA AGCTCCTCGG CTCTGCACTT TCTGTCCTGG GAACATGTGG 120
GGTGGGTGGT CTATGTATGG CCCTGAAGGG CCTCTCGGCA AATGTTTGAG ACCCACACCA 180
CTCTGGAGCA GTCACCTGAC CCAGAGGATG GAGGTTGGCT TGACTGAAGT TCCATAACCT 240
AAATCCCATC CTGCTATCAG AGTTCTTCCT CAGGCCTTCA CTGCAAAGGT TCCTCTGGTC 300
TACTCTATGG TCCGTGCTGA ATGACTTCAT ATCCATCCTC TCGTTTACTC TTCATGGCAA 360
CCTTATGAGG TGGGCAGGAC AAATATTTCC CTTTCTGTAG ATGTCAAAAT CGGACTCAGA 420
GAGGCTAAGT AACTTACCCA AAGCCACATA ACTTTAGGGA ATGAGTTGGG GAACCCAAGT 480
CTTCCAGCTC CTGGTCTTTG TCCTTTCCAA TACACTCCAG GGTCATGTAT AGCAGAAGGG 540
GCCAGTGGAC TGGTGTCTTT CTTTTTTTTT TCTTGAGAAA GGGTCTTACT TTTTTGCCCA 600
GGCTAGAGTG CAGTGATGCA ATCATAGCTT ACTGCAGCCT CAACCTCTCA GGCTCAAGCG 660
ATCTTCCCAT CTCAGCCTCC TGAGTACCTG GGATTACAGG AGCACACCAC CACACTTGAC 720
TAACTTTTAC ATTTTTTGTA GAGACAAGGT CTTGCTATGT TGCCCAGGCT GGTCTGGAAC 780
TCCGAGGCTC AAGTGATCTT CCCATCTCGG CCTCCCAAAG TGCTGGGATT ACAAACATGA 840
GCCACCTCGC CCAGCGCCAC AGTGTCTTTA ATGGCTCATA GAACTTAACC ACAGACATCA 900
TGTCTGTTAT ACAAATGCAG AAATCATATT GAGCTTTTAA ATTTACTTTG CTATCACATT 960
TATTTTGACA AGCGCTTGAG ATTTATTTCT CAATAAAAGC TACTTTAAAG TACACCACCA 1020
ATTTTATCAC TTCTGCTCAT TTTTACCCAG TCAAAAAAAT AACGTAAAAG TGTTACGTTT 1080
TGAGGTTCTG TTTCTCATTT TCTCATCAGA GTTGAAAATT ACCATTGTGC ATGAATTTAG 1140
GCCTGTGTTA GGCTGGCAAC CCATTAAAAC TCCTCTGCTT TTTAGCCGGT CTGGAGCTAA 1200
TAAGCCGGCC CCTCCCAATT TACACATCTC CTGTGAGATC CAGTGTCTCT CTGTCACTCA 1260
TTACCAAGCT CCTTACTAAA TGTCATCACA AAGATGCCAC ATCACCCCTC TTAGTCATCT 1320
CCCCACTTCC TCTTGCTGGC CATGGCCAGA AAGAAATCAG GGGCCGTAGG GAGGCCTAGA 1380
AAGTGACCAC AGAGTTGGGG GTGGCTGTGG GAAGTGGATG GGAATGGCCA CTGCTGAGCT 1440
GGCCACAGAG ACTGTGACAA AGACAAAGGC CTCTGTGTTT GGGATGGCAG GGAGGGGGCC 1500
AGAGGCCGAG TCAGGGCTGG CATGCTGATA GTCTGGGAAA GGCCTCCCAG GGCAGAGGAA 1560
AGCCCACAAT GCCACTCTGA GTTGGCCGCT CTTAGCACTT GGAAGTAGCT TAGTTGGGTC 1620
CTGATACACA GTAGGGGCTC AGCAAACATT TGTTGATTGA TTATTTGGCA GGGTGGCGGG 1680
GTTGGGGGTA AGGGATGCCT TTAAGCTGAG GTGGGTAAAG GGAATGTCCT TTCCCTTTCT 1740
CCTGCCCACG GGAGCGCTGA AGGTGCTGAA TTTCCCTGGC TTGTTCAGAG GCCACCTCTT 1800
TGCTTCCTTG ACCTCTCCCT GACATTGGGC TCTGACGCAT GTGGGGTAAT GCACAGGCTT 1860
TGGAGTCAGC CTGACCCGGG TTCCTACAAC CTCCCTGAGC CTCAATTTTC TCGTCTGTAA 1920
AATGGGGGCA ATAATACTCA GGCCAGGGAA TTGTGAAGAT CATCCTAGAA GGTGTTAAGC 1980
ACCCTCTGGC CTAGAGCCAA TGTTGGTCAT TCTTATGGTC CTTAATTTGG ATGCCCCGTG 2040
GCTCGCTGCA CCCCCATGTA TAAAATAAAT CCTTGATCCA CCGAACGTAC ACCGGACAGG 2100
CAAAGGGATG GAGCGAAGTC AAGGATGCCT CATTTAGCCC CAGCCATGCA GACTATACTT 2160
CGGGGTAGAT TTATCCCCAA ATGGATGTTT ACGTATCAGA CAGGGGATGC TTCCCTGTCT 2220
GAGGGTCAGA TGGACGGGTG GAAGGGTTAT CTGTGGTGCT GGCTCTAAGA TATATGGTCC 2280
CTCAGGCCCC TCTGGGCTCC AGACTGCAGG CCTCCAGGGG ACGAGGGGGG CAGAGTGGCC 2340
TGGGGTTTTG TTTGGCAACA CTGGCCTATT ATCTGGCCCA GGCTGTGTTT CCAGGGCATT 2400
GTAAATAGCA CCCGCTTGGC TCTGGAAGGA GGAGCCGCAG ATGTGGCTGA GGCAAAATAT 2460
ATGGTAAGGT GGGAGATTTG AAATGATAAA CTCGAGGCTT GTGAGCCAAA ATACAGGCTG 2520
GGGCCATCTC CAGGCAATAG GACACCAGGG AGGGCTCAGC CTGGATACCT CTGTGGTGAA 2580
GGCCTGACTC ACAAAGCCAG ACAGAGCCTG TGCTCAGTGG CCCATGGGCC AGGGCTGCCG 2640
GCTCTGTTTG CTTCCATCTG CCTCTTTGTA GAGAGCCTGG GCTGCTTCCT AAACTCAGCC 2700
AGAGGAGTGA ACAGAGCTTG AGCCAGATTT CAGGTCTAGA GAGAGAAGCA GGAGAAAATG 2760
TGAGGGTATA TTCACCTGCA AAAGGCCAGC CACTGTGTGT TCCAACCGAG AAGGAGGGAA 2820
TCCTTTTCTC TTCTTTTATT CTATTGTCTT CTATTTTAAT TGAGGTATAA TTTACAAACA 2880
GTGAAACACA CAGATCGATG TGTTTTTGAC AAATGAATAC GCCCATGTGA CCCACACCGG 2940
ATCCAGATAT GGAACATTTC CATCAACCCA CAGAATTTCC CTCCTGTCCC TTTTGTCAAT 3000
GTGCTCCCAC CCACTGTCTC CGTGTTCTGA TTCGTATCAT CATAGATTAG TTTTGCCTGC 3060
TCTTGAACTT CATATAAATG GAATCATGTG GTAGGTTCTA TTTTGTGTCT GGCTTCTTAG 3120
CTCAGCATAA TGTTTTTGAG ATTCATCCAT GTTGAATGAT GTATTTTGCT TCTTTTAATT 3180
TCTGACGTAT GAATGTGCCA CAGTTTGTTT ATGGGAGGAA ACTTGAGATT CCTTTCATTG 3240
CGGTAGGATT CACATCTATC CAGCATCAAT AGAGTATCTG CCAGGGTTTT GAGAGTTAAG 3300
CTGGTCGGTC CTTAGTGGAT GTTTAAAGTG TTCAGTGTCA CCTTCTTTGT TCCCAGACAA 3360
CTTCCCCATT TCTGTGTCTT GCTGTAAAAG ACCATAATGC CTTTTCTTCC CTCCATGGAC 3420
TGGAGCTGCC TTTATCTCCT GGAGCTGGGA AGTTCAGATC ATTTGTAGAG GGGCCCCTGG 3480
TTTCCCCATA AGACAGAATG TTATTCTTTA ATCTGAATTG AGCTGACACG 3530