Tag | Content |
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EnhancerAtlas ID | HS130-02118 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr1:159891880-159893220 |
SNPs | Number: 2 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Myod1 | MA0499.1 | chr1:159892832-159892845 | AGCAGCTGTTTCT | + | 6.28 | Tcf12 | MA0521.1 | chr1:159892831-159892842 | CAGCAGCTGTT | - | 6.32 | YY1 | MA0095.2 | chr1:159892039-159892051 | CAACATGGCTGC | + | 6.14 |
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| Number of super-enhancer constituents: 46 | ID | Coordinate | Tissue/cell |
SE_02009 | chr1:159887204-159896462 | Aorta | SE_02391 | chr1:159891163-159896016 | Astrocytes | SE_09609 | chr1:159888811-159896163 | CD14 | SE_10233 | chr1:159889294-159896142 | CD19_Primary | SE_10984 | chr1:159884833-159896640 | CD20 | SE_11910 | chr1:159890466-159896330 | CD3 | SE_12862 | chr1:159890202-159896191 | CD34_Primary_RO01480 | SE_13325 | chr1:159887045-159896510 | CD34_Primary_RO01536 | SE_14052 | chr1:159890274-159896187 | CD34_Primary_RO01549 | SE_14513 | chr1:159890132-159896515 | CD4_Memory_Primary_7pool | SE_15769 | chr1:159891344-159896220 | CD4_Memory_Primary_8pool | SE_15949 | chr1:159891339-159896140 | CD4_Naive_Primary_7pool | SE_16460 | chr1:159890826-159896099 | CD4_Naive_Primary_8pool | SE_16913 | chr1:159890317-159896307 | CD4p_CD225int_CD127p_Tmem | SE_17500 | chr1:159889525-159896840 | CD4p_CD25-_CD45RAp_Naive | SE_17880 | chr1:159889025-159896700 | CD4p_CD25-_CD45ROp_Memory | SE_19597 | chr1:159888663-159896506 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20057 | chr1:159890184-159896627 | CD56 | SE_20849 | chr1:159889345-159896337 | CD8_Memory_7pool | SE_21561 | chr1:159891197-159896204 | CD8_Naive_7pool | SE_22506 | chr1:159889745-159896593 | CD8_primiary | SE_23567 | chr1:159891451-159896346 | Colon_Crypt_1 | SE_23939 | chr1:159892115-159896031 | Colon_Crypt_2 | SE_25013 | chr1:159890918-159896336 | Colon_Crypt_3 | SE_30108 | chr1:159891067-159896091 | Fetal_Muscle | SE_31985 | chr1:159891083-159896707 | Gastric | SE_34858 | chr1:159890807-159896516 | HeLa | SE_36438 | chr1:159891272-159896570 | HMEC | SE_38165 | chr1:159890321-159896029 | HUVEC | SE_40207 | chr1:159890880-159896228 | K562 | SE_41182 | chr1:159890906-159896421 | Left_Ventricle | SE_42315 | chr1:159887173-159896572 | Lung | SE_44957 | chr1:159891221-159895990 | NHLF | SE_47692 | chr1:159891560-159896059 | Pancreas | SE_48986 | chr1:159891201-159896458 | Right_Atrium | SE_49778 | chr1:159891574-159893172 | Right_Ventricle | SE_50509 | chr1:159888888-159896553 | Sigmoid_Colon | SE_52604 | chr1:159889149-159896485 | Small_Intestine | SE_53483 | chr1:159887801-159896526 | Spleen | SE_55434 | chr1:159890662-159896015 | Thymus | SE_58180 | chr1:159892507-159896090 | VACO_9m | SE_59359 | chr1:159879583-159907614 | Ly3 | SE_63031 | chr1:159879414-159896447 | Tonsil | SE_63399 | chr1:159883649-159916570 | NCI-H69 | SE_64771 | chr1:159890244-159896649 | NHEK | SE_65431 | chr1:159891110-159896368 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
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Enhancer Sequence | GCTCCCCCTC TCCCACACAC CCAGGTTAAA CAATCCCGTC ACCCCCTCTC AATGGACCTT 60 GGGGCTCTGC GAAATACAAG GGGACCAGCC TGCCTCAAAC CCTCAACACC TCTCGGCCGC 120 AGAGGCTGTG TCTTGGGCCA GTCCCTCCCG TCCCGACTCC AACATGGCTG CTCCTTTTTA 180 CCCCAGCTTA TCAAGCTGCA CATTTCCGGC AGATCCTCCC CTAAATCAGT TATTTTTAAA 240 CCTCATTAAG AGCAACCCGC CCCCTCCACT TCCCCCAGCC CGAAAGCTGG GCCAGATAAA 300 TGTCAGTCTG GGCCCCGACC CACAGCGCCA GGCACACACA CCATCAGCTT GGGGAAGGCA 360 GGCGGGGTGG GGTGGCTGAG TTCTGAGGAG AAACCAAGAG AAGCATCCCT GCCCTTCCCA 420 GAGGCCACTC CACCATAGAA ACCTCTAACC TCTGATGCAC AGGGGAATGG CTGGAAGACA 480 GGTAGGAAGA GGAAGGGGCT AAGAGCTACT ACCACCAGTA AGCCCCCTTT CCGCAGCCCA 540 GTTCCAGACC TCTCTCCTGG GAGTGGCTGT GCTCAGGGCT GTTTCCAGGG ACCAAGTGGC 600 CTGAGGCTCG GGGATCACCA TGGCACAGGT AAAGAAAGGG CAGGAGAATG ATTAACCTAG 660 ACACTGGGGT TAAGAGCAGA GAGAAAGGCC TGAAGCCAGA CACTTCCAGT GCCCCCCAAC 720 CCCCCAAGGC AGGACAAACT TGGCCTCCCA GACCCACCAC TGGGTGGAAA GTGGATGCTG 780 AGGAACCCCC TCCACCGCCC AACGCTGGGG CCTGGACACA GCTGGCAGGG TCACGGCCTC 840 CAGCTGCAGT GTATCTGCTC CACTCTGGGG CCATTGCCCT CAAGCTCTGA GGTGCCAGAG 900 CCATAGGGCG GGGTCCTGAG AAGGGGCAGT TCCAACCAGG CCAGGCCTGG TCAGCAGCTG 960 TTTCTCTTCC CCACCCCCAC GGGCAGGCAG AAGCTGATGG GCTGCGGCTG CTGGAGCTGG 1020 GAAGGCCCAC CCTAGGGACA CCCAGGGGAC CTGCCCCTGC CTTCCCTCAA ACATAAAGAA 1080 AACAGTAAGC AAGTTGCCTA CCAGGGTGAG AAGAGATATG CCCAGCTGGA AGACAGGTGT 1140 GGGGGACCCC CAGAGCTGGG GACCCCAAAG GAAGGTGACA GCTGAACAAC CTGGGGGATG 1200 GACTGGCAGG GAGCAACCTA AACCCTAGCG CTACTGCAGC TGTGAGAACA ACCCTCACCC 1260 TCACCCTGGA GTTACAATAG GCGGGAAACG GGGAGGGGCC ACGCAAGGCA CTCGGCCCCA 1320 CCCAGACCCT GGGCTGGAAG 1340
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