Tag | Content |
---|
EnhancerAtlas ID | HS130-00763 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr1:54800470-54802200 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
GLIS1 | MA0735.1 | chr1:54801969-54801985 | TGGCCCCCCACGTTGG | + | 6.17 | JUN | MA0488.1 | chr1:54801615-54801628 | AAGATGATGTCAC | + | 6.2 | ZNF263 | MA0528.1 | chr1:54802037-54802058 | CCTCTCCTCCTTCCCTCCTTT | - | 6.07 | ZNF263 | MA0528.1 | chr1:54802049-54802070 | CCCTCCTTTTCTCCTTCCCTC | - | 6.68 | ZNF263 | MA0528.1 | chr1:54802045-54802066 | CCTTCCCTCCTTTTCTCCTTC | - | 6.86 |
|
| Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
SE_03678 | chr1:54800045-54802545 | Brain_Angular_Gyrus | SE_04187 | chr1:54800078-54803172 | Brain_Anterior_Caudate | SE_04901 | chr1:54799713-54803367 | Brain_Cingulate_Gyrus | SE_05919 | chr1:54788288-54803304 | Brain_Hippocampus_Middle | SE_07802 | chr1:54800038-54803161 | Brain_Inferior_Temporal_Lobe | SE_09001 | chr1:54800783-54800982 | Brain_Mid_Frontal_Lobe | SE_09001 | chr1:54801043-54801652 | Brain_Mid_Frontal_Lobe | SE_25961 | chr1:54799926-54802545 | Duodenum_Smooth_Muscle | SE_26701 | chr1:54799961-54802480 | Esophagus | SE_28122 | chr1:54800008-54802704 | Fetal_Intestine | SE_29698 | chr1:54799917-54802477 | Fetal_Muscle | SE_31383 | chr1:54800045-54804738 | Gastric | SE_33414 | chr1:54799968-54802660 | H2171 | SE_39253 | chr1:54799970-54803315 | IMR90 | SE_41605 | chr1:54801000-54801768 | LNCaP | SE_42582 | chr1:54799999-54802933 | Lung | SE_46626 | chr1:54800102-54800970 | Ovary | SE_46626 | chr1:54801013-54803133 | Ovary | SE_50141 | chr1:54800071-54803314 | Sigmoid_Colon | SE_52383 | chr1:54799963-54803178 | Small_Intestine | SE_63284 | chr1:54754699-54809827 | NCI-H82 | SE_65414 | chr1:54800150-54802663 | Pancreatic_islets | SE_66951 | chr1:54799968-54802660 | H2171 | SE_68686 | chr1:54801913-54803319 | H9 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I054329 | chr1 | 54794861 | 54804767 |
|
Enhancer Sequence | CACAGAGCCG ACTGGCAGCT ACATTCAAGG GCCACTTTCT CACTTGCCGT TCAAATGAAT 60 CTTCTTCATC CTGTGCCTGT GAAGTTGATT TTTTTGAACC CACATTGTAG GACTTTACAT 120 TTATGCCTAT TAAATTTCAT CCTGTTGTTT TGGACCTGGA AATGGGAATA GGAGGCTGAA 180 CTAATAAGCT CTGACTCAAG CAGCACAGAG GCACTGCCCC GGGAAGAGCT GCAACCCCCA 240 GGAAAGGACA AGGGCCTAGA GGAGCCAGGC TCTCAGAACT AAGGTGACAG CCACAGCTGT 300 GAGGGCCTCA GCCAGCTCTG CCCTTTGTTT GCCCAACACC CGGACACAAG AATCAGCTCT 360 TGTTACCAGA ATCCCATCAA GAAGGGCAAA GCACTACGCT TTCAAAAATA AAGCCACATG 420 TGCAAACTGT TGTCATAAAC ATAGCCCTGT TCAAGGCCTC CGCTGCATTC CTCCTTGGAG 480 AGCAATATGT TTCATTTCTT CAACATAAAC AGAATCAGAT TTATTACATT CCGACAATGT 540 TTCTAGGATG GGGACTGAGA AAGCTGCATT TCTGGGAACA AAAGGCACTT GTGCATAAGT 600 GTGCAAAGAA AAAGGAGACA AGAGACAAAA ACCACCTTCC AGACTCTGGG CCCCGGCAAC 660 TGTGATCCAT GTCAAGAACC CTCATGCAAT CTGCCCTGCA TGGCTGGCAG AGACAGCAGG 720 AGACAGAGGC TGATTTAAGG CTAGGGCTGA AGATCATGTG TCCGGCCAGA CTTACCACAG 780 GCTGCCATGG GCCCCAGAGT TTCACAACAT TTAAAGTCTA TCTCCCCGGT GCCCAAACAC 840 ATCGATTCAA GGAAACCTCC CTGAGACCGA GAGGCCCAAA AAGGCGCAAG GCTCATTTCT 900 GCCTGTCCTC AGGAGCCAGG GAGGCACGCA CAATCCCGTA AGACAAGCAC TCTGATCCCT 960 GGAAGGTGTC AGAGAAACAG CAAGGGGCTG GGTTCTCACT CAAATGGTCA GCTCTTGTCG 1020 CTTCTCCCAG GCTGGACAAG GCAGCAACGC AGAGGAATTC CTGGGGAATC CAGGCAGGAA 1080 AAGGAAGTAG CTGGGGGAAG GGCAGGAGAA ATAAGTCTCG CAAGGGAGGA TTAAGAGCAG 1140 GAGCCAAGAT GATGTCACAG GACAAGCATG GGCACTGGAG CCAGAGAGAT GGGCGCCAAT 1200 TCCAGCTTTA CCGCTTCCTG TGTGGCTTCG ACCGATTACT TAACCTCTCT GAGCTTCAGC 1260 TACTACATCT GCAGAAAGAA GGGAATAAAC AGAACCATCT CTAAAGTTCT TCTAGCACTG 1320 GCACTCTGGA TTCTTAGCCA GGGACTTCTG TACCTCTGAT GGGCATAACT TCTTAAACTT 1380 CTAACTATCC ATTCCAGAAA GACTATAATC CAGTGGGCTA TCCTGTTTCC TTTTACCCAC 1440 TGGGTCTCTG CAGTAAGCAG GGCAAATATG AGATGGGATT AAATGGATGC TGACTAACAT 1500 GGCCCCCCAC GTTGGGGGAC TCACCGGAAA TCTTCCTGAA GCCCTCAGAG GCCCCAGCCC 1560 CCGACTGCCT CTCCTCCTTC CCTCCTTTTC TCCTTCCCTC ACAACACTAA TTGGGAGGGA 1620 CTGCATTCAA TTCCTGCCCA TTCTCGGTGA GCATCCCTGG CTCCCATGCA CACGCAGGTG 1680 GGGAGGGGAG AGCCAGCACT GTCCAGAGCC TCCCAAGCCC ACGGAGCCAA 1730
|