| Tag | Content |
|---|
EnhancerAtlas ID | HS130-00511 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr1:28852240-28854370 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr1:28852370-28852388 | AGAAGGAAGGAATGAGGG | + | 6.62 | | Foxd3 | MA0041.1 | chr1:28852802-28852814 | AAACAAACAAAC | - | 6.32 | | Foxd3 | MA0041.1 | chr1:28852806-28852818 | AAACAAACAAAC | - | 6.32 | | Foxd3 | MA0041.1 | chr1:28852810-28852822 | AAACAAACAAAC | - | 6.32 | | Nr2f6(var.2) | MA0728.1 | chr1:28854305-28854320 | GAGGTCAGGAGTTCA | + | 6.22 | | Nr2f6(var.2) | MA0728.1 | chr1:28852715-28852730 | GAGCTCAAGAGGTCA | + | 7.14 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_13857 | chr1:28851731-28852649 | CD34_Primary_RO01536 | | SE_15100 | chr1:28851665-28852922 | CD4_Memory_Primary_7pool | | SE_21360 | chr1:28851657-28852901 | CD8_Memory_7pool | | SE_34487 | chr1:28851737-28854440 | HCT-116 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I028525 | chr1 | 28851532 | 28854745 |
|
Enhancer Sequence | ACCTTTGGTT ACTTTCCCAT CTTTAGTATT TAGTTCTCCT TCCCCAGGAT AATCAGCAGA 60
AAAGTGCCTG GCCTTGTGTC CATATACCAT GGAGGGGAGA GCTAGAGAGG CGAGGTTCTC 120
GGGAACCACT AGAAGGAAGG AATGAGGGGG CTGCTGGTTA GGCCCAGAGC TGAGACCGAG 180
AAGGGCTCTT GGAGTTCTCC TTCCCTTCGT AACATTAGGT AGAGGCTTAG ACAACTTGAT 240
TGTTTTTCAT GACCTTAAAG ACTGTGGCTC CGGCCGGGCA TGGTGGCTCA CAGCTGTTGT 300
AATCCCAGCA CTTTGGGAGG CTGAGGCGGG TAGATCGCTT GAGCCCAGGA GTTCTAGACC 360
AGCCTGGGCA ACTTGGCAAA ACCCTGTCTC TACAAAATAT ATAAAAATTA GCTGGACACT 420
GTGATGCGCA CTTGTAGTCC CAGCTATTCT AGAGGCTGAG GTGGGAGGAT CACCTGAGCT 480
CAAGAGGTCA AACCTGCAAT GAGCCGTGAT TGTGCCACTG CACTTGAGCC TGGGCAACAG 540
AGAGTGAGAT GCTGTCTCAA AAAAACAAAC AAACAAACAA ACAAAAACAA GTACTTGATG 600
ACTCCATTGG GGTCAATTAT GAAGAGACCT CTTAGTGCAA GACCAGGACC TTCTAACAGC 660
ACACCGAAGT CTCGAGAAAT TCGCTTAGTT AAATCTGACA AGGGTGCGAT GTTTATGTGG 720
CCCAAAGCAC CATTCTTTCT TGGTGTATTT ATCCAGGCAA GACGGCTAAA GTGGGAATCC 780
ACTGAGACTG CAACAACTTC AAAGTTCACA TCGTGAAATT CCTTAGCTTT GTCACTAGAA 840
GCAACAATTT CTGTAGGACA CACAAAGGTG AAATCCAAAG GATAGGGCTG GGCGCGGTGG 900
CTCACACCTG TAATCCCAGC ACTTTGGGAG GCTGAGGTGG GTGGATCACC TGAGTTCAGG 960
AGTTCAAGAC CAGCCTCACC AACATGGTGA AATCCCATCT CTACTAAAAA TACAAAAATT 1020
AGCCAGGCGT CGTGGCAGGC GCCTGTAATT CCAGGTACTC AGGAGGCTGA GGCAGGAGAA 1080
TTGGCTTGAA CCCAGGAGGG GGAGGTTGCA GTGAGCCGAG ATCGTGCCAC TGCACTCCAG 1140
CCTGGGTGAC ACAGCAAGAC TCCGTCTCGG AAAAAAAAAA AAAAAGAAAG AAATCCAAAG 1200
GATAGAAGAA AAGCACCAAA TATTTCCCCT CAAAGTCATC AAGGCTTAGG TCTTTGAACT 1260
CTCCATTGAC CACGGCTGTA CCCTTAAAAT AGGGCGCATG CTGGGTGACA TCAGGTGCAT 1320
GGTATGAGGA ACTGGTACCA GAATTTTGCT TGACCGGAAC CAGACCACAA TATGTTTGTC 1380
AAACTTGTTC TTCCAGAAGC AGCAGGCCTG AGGGCTGCAG TGGCAGAAAT GCCCCCAAGG 1440
AATGGCACTC ACATGCCGGG CAACTGATGC TCAGAGTAAC CTTCCCACAG CAGCCGCGAT 1500
CTTCAGTGCA TGTGTGTTTT TGTTTTTTTG AGACAGTGTC TGTCTCTTTC GCCCAGGCTA 1560
AAGTACAGTG GCACAATCTC AGCTCAATTT AGCCTCAGCC TCCCAGGCTC ACGCCATCCT 1620
CCCACCTCAG CCTCCTGAGT AGCCAGGACT TCAGGCGTGC ACCACCATGC CCGGCTAATT 1680
TTTGTAATTT TTTGGATAGA AATGGGGTTT CGCCATGTTG CCCACGCTGG TCTTGAACTC 1740
CTGGGCTCAA GCGATCCTCC TGCCTCGACT TCCCAAAGTG CTAGGATTAC AGGTGTGGTG 1800
GCACCTTGTC TCTAAAAAAA ATCAATCAAT TAAATAAGAA AAGAAAATAG CTCTTCTCCC 1860
CCTCTGATTA TAACAACACA TTACCAAAGT TACTGGTGCT TACATGGGGT TGAATGGAGT 1920
TATGATGGAT ATTTCATTTA ATGTTGTTCT TCAATGTTTT AATTTTTTAC AACAGACTTA 1980
AAAATTTTTT AAATACATGT GGCCAGGCAC GATGGCTCAC GCCTGTAATC CCGCACTTTG 2040
GGAGGCCAAG GTGGGTGGAT CATCTGAGGT CAGGAGTTCA AGACCAGCGG GACCAACATG 2100
GAGAAACCCC ATCTCTACTA AAAATACAAA 2130
|
