| Tag | Content |
|---|
EnhancerAtlas ID | HS130-00434 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr1:25038660-25042110 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Gata1 | MA0035.3 | chr1:25040433-25040444 | ACAGATAAGGA | - | 6.14 | | Nkx3-2 | MA0122.3 | chr1:25040970-25040983 | TTAACCACTTAAT | + | 6.98 | | PLAG1 | MA0163.1 | chr1:25041746-25041760 | GGGGCCCAGTGGGG | + | 6.36 |
|
| | Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
| SE_03668 | chr1:25040374-25042450 | Brain_Angular_Gyrus | | SE_04517 | chr1:25039777-25046067 | Brain_Anterior_Caudate | | SE_05379 | chr1:25039323-25045756 | Brain_Cingulate_Gyrus | | SE_06312 | chr1:25039257-25047436 | Brain_Hippocampus_Middle | | SE_07165 | chr1:25039649-25046190 | Brain_Hippocampus_Middle_150 | | SE_08484 | chr1:25039603-25046303 | Brain_Inferior_Temporal_Lobe | | SE_37045 | chr1:25038553-25042895 | HSMMtube | | SE_52042 | chr1:25039096-25042494 | Skeletal_Muscle_Myoblast | | SE_56631 | chr1:25039826-25042599 | u87 | | SE_63833 | chr1:25039082-25042558 | HSMM |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I024712 | chr1 | 25039058 | 25042452 |
|
Enhancer Sequence | GGCTGGAGTT GCAGTGGCAC GATTTTGGCT CACTGCAACC TCCCCTCCGC CTCCCAGGTT 60
CAAGCAATTC TCCTGCCTCA GCCTCCCAAG TAGCTGGGAC TACAGGCAAG CGCCACCACA 120
CCCGGCTAAT TTTTGTAATT TTTTTTTTTT TGAGACGGAG TCTCGCTCTG TCGCCCAGGC 180
TGGAGTGCAG TGGCGTGATC TTGGCTCACT GCAACCTCCA CCTCCTGGGT TCAAGCAATT 240
CTCTTCCTCA GCCTCCCGAG TAGCTGGGAC TACAGGCGCC CACCACCATG CCCAGCTAAT 300
TTTTGTATTT TTATTAGAGA TGGGGTTTCA CCATGTTGGT CCGGCTGCTC TCGAACTTCT 360
GATCTCATGA TCCACCCACC TAGGCCTCCC GAAGTGCTGG GATTACAGGC GTGAGCCACC 420
GCACCTGGCT AATTTTTGTA ATTTTTTTTT AGTAGAGACA GGTTTCACCA TGTTGGCCAG 480
GCTGGTCTCG AACTCCTGAC CTCAAGTGAT CTGCCTGCCT CAGCCTCCCA AAGTGCTGGG 540
AATACAGGTG TGAGCCACTG TGCCTGGCCT CAATAAATAA TGTTTTGAGC ACCTACTATG 600
CAGCTGGCTC CATGCTGCAC TGAGGATACA GTAGTGCAGA AGACAGAGAG AAGACCTGCT 660
CCATGACACT GACATTCTAG TCCTTATTCA GCACCAAGAT CCTAAGTTTC CTTGGTTTTC 720
TTTCGGATGT CTTGTCCCAT TTGATTTTTA GAAAGACCCC ATGAGGTTAG AGCAACCTTA 780
CCCCATTTGA CAGAGGTGGA AACTGAGGCC CAGACAGGAG AACCGATGTC CTTTTTGCAC 840
AGTGCCTCAG CCGGCTGCCA TGAATATGTG TGTCCGTTTG ACAAAGGCAT GGGGATAGGA 900
GTGGTCAGGA GGCTCCATGT CTCCCATCAG CCAGCTGTTC TTCCTCTGCC TGGAGCCCTT 960
CCAGTGACCC AGCTCTCAAA TGTGGCCAAC CTCTTGCCCC TGAGCGGGAT CTCTGTAGCC 1020
CTCTCATGGC AGAGGTCCTG GAGGTGCGAA GTAGGGGTAC CGTGCCCAGG CTGCCCCTCT 1080
CCCCACTTGG TCTCCTACGT GCAGTGGACA TTTTTCCACT TGGTGTGACC ACACAAAAAC 1140
TCCACCCAAC ATCATCTTCA TGGATGCCTA AAATTCCACC ATCCATGATT CATTCTTTTA 1200
GGTTGAACAA CTGCTCCCAG GAATGTCTGA AATTCCCTGG AATCAGTTGC TAACACCTTA 1260
GTGAGCTAAA AACTGGCCTT ACAGATAATC ATCTACCTTC TGTAGACAAC TCTGGACCAG 1320
AAGAAGAAGT GACTTGCCCA AGGACACGTA ACCTTGGGCA GTCAGTCAGT GGCAAGCCAG 1380
GGCCAGAGGC TGGCCTTGCT CACACATTTT CCTGGGACAG GAGGAACAGA GCCATATACG 1440
ATGTTCCCTT GAATCACATC TACTTTGCAG CCTGCAGAGA GCCTCCCCAC CCAGAGCCCA 1500
CTTGATTCAG GCAATCCCTA TGAGCTGGGC ATGAGTCCCT CTCCCAGGCA CAGTGGCTCA 1560
CATAGACATG GGGATGCCAC AGGGACCTAG CCCAAACGTC CATTGCTGGA TCCCTGGAGT 1620
GAGGTTTCTG GTCTATCCAA GGCCTAGTTT AGCTCCTCCT TCCGTTCTAC CGGCAGCCCC 1680
AGATTCTTCC ACTGCCTTCC TTTTTTTTTT TTTTCAGTAA GCTCAAGTTG GTTTCTCTTG 1740
CTTCTAAAGA ACTCTAATTG AAATTCCCAC TTTACAGATA AGGAGACCAA GATGTGAAGA 1800
GGAAAGGTGA ATGCTAAGGT GGAGCCAGGC CTGCAACCCA GGTCTCCTAT CTCCTGGCCC 1860
AGGCTTTTGC CTCCTGCCAC GTTGCCTACT GTGAGCAGTT GGGTCCCGAG GAAAGAGAAG 1920
AGCAGAGAGG AGTGTGAGTG CATAAGCCTG AAGATAGAGG GTACAGTGGT TCATTGAGAG 1980
ATTTTGGAGT CAGCAGATCT GATCTTACAC TTACCTGTTA TGAAGATTTT GACAAGTAAT 2040
TTCATCTTCT CAGAGCCTAA CTTCCCAGCT ATAACATAAG AAAAAGAGGA CCTTCTTATA 2100
GTAGACACAG ACCCAACAGG AGCAGAGTGG GTGAGTAGAG CACTGGGTGG ATTTTAGCCT 2160
TCACATACTC ATCTATGGCT GGGTACCTTT GTGCAGTGAA CAATCTGGGC AACAGTACAT 2220
GACAGCCCTG AGAATAATGA TAATACCTGC CTTACATGGA TGTTATAAAA ACTAAATGAG 2280
ATAAGGTATG TGAAGTTCTG GGCACAGTGC TTAACCACTT AATAAGTCTT CAATAAACAG 2340
TAGCTAAGTA TTTTGACACC ATCACCCCAG GCTCCGTCTG GAAGGCTCTG GAAGGCAGTC 2400
TGTGGTGAAA TGGCAAGTCC CAAACTCCCC ACTTTCTTAC CACCAACTCC CAAACCTCAT 2460
AATTTTCCTG GATGGCCTCA GTGTCCTGCC TCTCCCTCCA GAGTTCTGTG GGGTTGGCTG 2520
GACCACCAGG AACAGAGTTC TGGCATTTTC TATCACATCA CAGCTTTCAG TTTGGTAAAA 2580
GCCCCCGATA TATCAGGGCC CAACTGGCAA GTCCCTCCTG CTCCAAAGTT TTGAAGGTTC 2640
CAGGGTCAAG CCTTGGCCCC CAGCCTCCTC CCTCAGACCT GAGGCCGAGC ATAGTATATT 2700
CAGGGGCCTA GCTGCAGCAG GTCCTGAAAC CTGCTACAGC AGTCCAAGCC CCCTCAGTCC 2760
TCCTCTTTCA TTTCTGAGCA GGCCCAAGCA CCCAGCACCA AGAATGGCTG GACTTAGGGA 2820
CTCTGGGAGA GCCACGTGTG CCAGGCTAGT GCCTGCCAGC TCTTAGGCTG ATCTTACAAT 2880
GGCTCCATTC ACCAGGGAGA GGAGCTGGCC TGCCTGGAGC CCACGGGGTG ATGTTCCAGG 2940
CCCCAGGGGG ATGGGGTGGG AGGTTAGAAA CTAAGAAAGC GGTTGTTAAG GCTGGGAGGG 3000
GTGAAGGTGC CCAGCCTCCA CCACTACCAG CACCTTATGA CAAGGTGACC ACCTCACAAC 3060
TGGGACCATG AGAGATCAGA TTCTCTGGGG CCCAGTGGGG GTGAGTAAGT GCGGGGGCAG 3120
ATGGAGGGAA AGAGTTAGTC ATGGGCATTG CGGGGCAGGG AGGCTGGGCC CTTAGCCCAC 3180
GCTCTTGCTG GCATCTGAAG GCCCGTAGCC AGGGGGTGAC GTGGTCTTGG TCCTTGAAGC 3240
AGCCCTTCCA GTAACAACTG GGGCATCCCA GCCAGGCAGC CTTTGCCTCT CCCCCTCCTC 3300
TCCATGCCTG CTACCCCAGG TCTCCAGGAT CTCTCAAAGA GATTTTCATC TACAAACATC 3360
TCTGTCTCCA TCATCTCTCC CTTCTTCACT CACAAAGCCC AAGTTGAGTC CAAACTGCTC 3420
TGTCCTCAAA TTAAAGCCCT CACTGACTCC 3450
|
