Tag | Content |
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EnhancerAtlas ID | HS130-00189 |
Organism | Homo sapiens |
Tissue/cell | MDA-MB-231 |
Coordinate | chr1:12661580-12662740 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RFX1 | MA0509.2 | chr1:12662103-12662119 | AGTTGCTATGGTAACC | + | 6.62 | RFX1 | MA0509.2 | chr1:12662103-12662119 | AGTTGCTATGGTAACC | - | 6.63 | RFX2 | MA0600.2 | chr1:12662103-12662119 | AGTTGCTATGGTAACC | + | 7.04 | RFX2 | MA0600.2 | chr1:12662103-12662119 | AGTTGCTATGGTAACC | - | 7.05 | RFX5 | MA0510.2 | chr1:12662103-12662119 | AGTTGCTATGGTAACC | - | 7.29 | RFX5 | MA0510.2 | chr1:12662103-12662119 | AGTTGCTATGGTAACC | + | 7.4 | Znf423 | MA0116.1 | chr1:12661742-12661757 | GACACCCTGGGTTCC | - | 6.8 |
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| Number of super-enhancer constituents: 22 | ID | Coordinate | Tissue/cell |
SE_00009 | chr1:12643999-12666289 | Adipose_Nuclei | SE_01632 | chr1:12657273-12663305 | Aorta | SE_06647 | chr1:12650295-12664352 | Brain_Hippocampus_Middle | SE_26610 | chr1:12650552-12665003 | Esophagus | SE_31513 | chr1:12658513-12665251 | Gastric | SE_33994 | chr1:12661509-12662374 | HCC1954 | SE_38729 | chr1:12661061-12665642 | HUVEC | SE_40400 | chr1:12661438-12664822 | K562 | SE_40699 | chr1:12649875-12665358 | Left_Ventricle | SE_42271 | chr1:12658714-12665183 | Lung | SE_46249 | chr1:12660741-12665622 | Osteoblasts | SE_47179 | chr1:12644602-12665739 | Panc1 | SE_47724 | chr1:12662587-12662919 | Pancreas | SE_48357 | chr1:12658876-12663248 | Psoas_Muscle | SE_48733 | chr1:12658482-12665083 | Right_Atrium | SE_49489 | chr1:12659458-12663297 | Right_Ventricle | SE_51223 | chr1:12659355-12662475 | Skeletal_Muscle | SE_52608 | chr1:12659932-12665439 | Small_Intestine | SE_54972 | chr1:12658438-12662505 | Stomach_Smooth_Muscle | SE_56285 | chr1:12661792-12665146 | u87 | SE_65745 | chr1:12660943-12664165 | Pancreatic_islets | SE_67796 | chr1:12661792-12665146 | u87 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I012599 | chr1 | 12659967 | 12665524 |
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Enhancer Sequence | AAACCAATCT GAGGAACACC TCCAGAGCCC CCATCGGGAA AGCTGGAGGT GATGTTGTTT 60 GACCCATATA GACTGCCTGG CTACGGACTC CACTAGGGGC CATCAATGCC ATCTCTTCCG 120 TGAAACTATC AACCAAAAGG CAAGACTCAT TGGTTACAAG CAGACACCCT GGGTTCCAAT 180 CCTGCTGGGT CATTTACTAG CTGTGTGATT CTAAGTTACT GACTCTCAGA GTCCTGTTGG 240 TAAGAAGAAG ATGATAACGG TACCCACGCT GGAAGGTTAC TTCGAGTAGT AAATGACCTT 300 GTGACGTGTC AGGGCTTAGA ACAGTCCCTG GCACACAGTA GGTGCTCAGT AATCACTGGC 360 TCTAACTAGC TACAATGGGT CGGTCATGCA TTCATTTAGG CAACAACCAT TTATTAAGTA 420 TCTACTGTGG GCCAGATACT GTGCCAGTTG CCAGATACTT GGTGAGTGAG AGGGCATGCC 480 CCCTGCCCCT GTGGATATCA ACAAGCAGCC ACAAAGCGTG GTGAGTTGCT ATGGTAACCC 540 CTGACTTTGG CCTCACCGCA GCCCGGTCCT GACCAATTGA GCTACTTGGA CGCAGAGATC 600 AAAATGCCTT GTGCAGGGGA AGTTGGATGG TTGTGGGGGT TGGGCAGCCA GGACCAGAGA 660 GGAGGCTGTA CCCCTGACCA GCCTCAGCCC CTGGGTTGCA GAAAGGCCTA TGTTGGACCA 720 GCCCCTGCCT GGGAAGACAG GGGCTGTGCC ACGGGTCATC TCAACAGAGG TGAGGCCTCG 780 GGTGGAAGGG AGATGGCCAG ACTCCCTGTA GGGAGTGGTT CCCTCCCACA GACTTCTAGA 840 AAGGGTCAAA GTCTCCAATT CCCCCTGAGG GCTTCTGTGG CAGGGGCACA ACTCTCTGCT 900 TCCCGGGGGA GTCCCAGAAC CAAGGTTGAG TCAGGCCAGT GGGTTTTTTG CCTTTTTTCT 960 CTGATGTCCT GCTGAGCATC TGCTCTAATA TGCAGAAGGA GAAGGGCTGG AGCAGGGGGT 1020 ATCCACCGCC CCCCACCCCC AGGGCCATTG CCCCACCTGG AAGGAGTGGT TGTCTCTTGG 1080 AAACGCTCTT GCCATTACCC AGGAGGTGAT AGGAGCTTTT TCACTACATT TCCACACCTT 1140 CATTTTTCAG ATGAGGGAAC 1160
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