EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-37033

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr9:36419110-36420470

Target genes

Number: 8
Name	Ensembl ID

YBX1P10	ENSG00000213866
RECK	ENSG00000122707
GLIPR2	ENSG00000122694
CLTA	ENSG00000122705
U4	ENSG00000222760
GNE	ENSG00000159921
HMGB3P24	ENSG00000215283
RNF38	ENSG00000137075

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

DMRT3	MA0610.1	chr9:36419465-36419476	AATGTATCAAG	+	6.02
Foxd3	MA0041.1	chr9:36419818-36419830	AAACAAACAAAC	-	6.32
NR2C2	MA0504.1	chr9:36419743-36419758	TGGGGGCAGAGGTCG	+	6.14
Zfx	MA0146.2	chr9:36420289-36420303	GAGGCCGAGGCGGG	-	6.01

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH09I036419

chr9

36419189

36420753

Enhancer Sequence

CACTCAAAGG AAGTACTCAA TGGAACATTT TGGATTTTCA GATTTGGGAT GCTCAACCAG 60
TATATAACGC AAATATACAA AACCTGAAAA AAATCCAAAA TCCCAAACAC TTCTGGTCCC 120
AAGCATTTTA GATAAGCGAT ATTGAACCTG TAAGTACATT TTCCATCTTC CCTGAAGGCA 180
GTATGCATGG GATTACTTAT ACCACAAGCT GGATGGGTGC TTTTTTCCAA GACAAATGAA 240
TGAAGCCTAC TATAAGGAAT TCTTGTCAAG AAAGACTCCT GCTCTGAATC AGTACACATA 300
AGCAGTTTAG GAAGAACTCT TCTATTTTCG TTTCTCAAAT GGCCATCCTC CTGGCAATGT 360
ATCAAGAACT CTGAAAAAAT ATATAATTGA GGCTACAAGT TAATTCACCT CAACTGAGAG 420
AATAGTCTTA TCAAATTCTT CAATATTTTA TCTCATTCTC AGGTCAGACC TAGTTCCCCA 480
GCTCAAGCTT GTTGTCACTG TGAAAATGTG ACTATTTTCA AACTGACATT AGCTGAGTTA 540
ATTTCAGTAT CTAAGTGAAA CATGACTACA GGTGGCACGG CATCTGTATT CCCAGCTACT 600
TGGGAAGGCT GAGGTGGGAG AATCCCTTGA AGGTGGGGGC AGAGGTCGCA GTGAGCAGAA 660
ATTGCGCCAC TGCACCCCAG CCTGGGTAAC AAAGTGCGAC CCTGTCACAA ACAAACAAAC 720
AAAAAACTCG CACAGAATTC TGAACCTGAC ACAGGGTAGG GATGACTTGG CAAGGAGCCT 780
GGAATAACAA ATAGTCATGA ATCAGAATAA AGGCCTGGGG GCAAGAAAAA AAACTACCGA 840
GAAGGACTGG TGCCAATGGT TCAGTTCCAC TGTGACTCTC TGAGGCCTTC TCCACTTGCA 900
GATATGTTTC TCCAAGCATG TCACAGTTGA ATGGGTGAAG TTAAAATAGG AATAGGTTTC 960
TTCAAACAGC AGAGTACAGA CTTGAGCAAG GCAGCTTGGG ATGGAATCCC AGTGTACTGC 1020
TGTGTGATCT TGGGTAAATA TTTAATCTGT GCCTCAGATT CCTCACTGAT AAAACTGGAA 1080
TAAAGCAGTC CCTACTTCAA AGGGTGTTGT GACTACCTGG TTAAAAGGAC AACCTTCGGC 1140
CGGGCACGGT GGCTCACGCC TGTAATCCTA GCACTTTGGG AGGCCGAGGC GGGTGGGTCA 1200
CGAGGTCAGG AGATCGAGAC CATCCTGGCT AACACAGTGA AACCCCCTCT CTACTACAAA 1260
TACAAAAAAT TAGCCAGGCG TGGTGACAGG CACCTGTAGT CCCAGCTACT AGGGAGGCTG 1320
AGGCAGGAGA ATGGAGTGAA CCCAGGAGGC AGAGCTTGCA 1360