EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-36942

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr9:32671780-32673570

Target genes

Number: 14
Name	Ensembl ID

ACO1	ENSG00000122729
DDX58	ENSG00000107201
AL353671.1	ENSG00000203542
C9orf133	ENSG00000235453
TOPORS	ENSG00000197579
AL353671.3	ENSG00000203659
TIGD1L2	ENSG00000241043
RP11	ENSG00000232303
APTX	ENSG00000137074
DNAJA1	ENSG00000086061
SMU1	ENSG00000122692
B4GALT1	ENSG00000086062
BAG1	ENSG00000107262
CHMP5	ENSG00000086065

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HNF4G	MA0484.1	chr9:32673405-32673420	AAAGTGCAGAGTCCA	+	6
RREB1	MA0073.1	chr9:32671884-32671904	ACCCCAACCAGCCACCTCCA	+	6.48

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH09I032672

chr9

32672122

32673150

Enhancer Sequence

AGAAAGGGTG CAGAAGTATG AGGCTGCAGG TGAGGCAGAA AGCACCCCCT AGCCAGCTGG 60
AAGCCACTAC ACTGTTCAGC AGACTTGACT GAAGCAGGTG TCCAACCCCA ACCAGCCACC 120
TCCACCTCCA CCAAGTTGAT GGGGCCTCCT TTGTGGGGAG AACTGCTTTC GCCTGATGGC 180
ATATGAAAGA AACAACAGAG GCTGGCAAAC AAGGCTGGTC ATGAAGGGCT CACTCACCCA 240
TCACATAGGC ATTGGGCACT ACTGTGCATC CGGCATTGGG CCAGGCACTC CAGAGTCCCG 300
ACACCTCCCT GCCTTTCAGG AGCACGTGTT GTACTGCAAG AGCATGGGAC CAGGTAATGC 360
CAATGTGTGT ACTCAGTGTG GTCAAGGGCT CCTCCTGACC GCCACTGGCC TACTATGAGG 420
GCTTCAGCAA GTCACTTCAC CCTCTGGAGC CTCATTTTAC CCACTTGTAA CATGAAGGTA 480
TTGGACCTGA TGATCCAGAA GGTTCTCTTC CAGGTCATGA AACTTCTCCA ATTCCATAGG 540
GACTACATAC AAAGCTTTTG CAGGAAATTG TATTGCTATC ATTGAGCCAC TAGATGACAA 600
CTGCACTTTG TTTAGGAGAA ATGCTACCTT GGAAGAGTCA CTGATGAGAA CAGCCACAAA 660
CACAAAAATG GGTTTTTTAT GCCAGTGAGG AATTATGTAG TTAAATGGAC AAAATCGAAC 720
TGCAAAACAG CGGATAGTAT CTGTCACCCG TATGACAAAA TATGCTTAAT TATCAAAACA 780
ACATATCTAA CTGTTTCTGT GCTGATTCAG AAGACACTTG GGGATCTTGG AGAATCTCAT 840
AGTTGTGGTT TGGGAGCAGA AAGTGGAGTT CTCGGCACTG ACGTCAGGAG ACCTTCTGGT 900
CCCAGCTCTT GCTCTAAGAG TTTGTTTGAC TTTGGTGAAT CATGCATCCT TCCTCTACCT 960
TTGTTTCTGC ATCTTTAAAA CAAGGAGGGG CTCAACCAGA CTCCGTGAAT TGGCCCTAGT 1020
TCTAGCATTC TACAGTTCTC TGGATCAGAT TGCCAAGTGT AATAAAGATT TCCAGCACTA 1080
GATATGGATG AGAAATCCCT ATCATTTTTG GTCTCTAGAA CAAGAGAAAG AAGGCCTACT 1140
GTCACATGCA TGTTTAGAAC GCAACATGTG ACCACCATGA TTTGGGACAG CTTGAGGGAG 1200
TCTCTGACCT TTGCCAAAGA AGTCTTTGCC AAATTAAAAA TCCCATAAAA CTTGAAGTCT 1260
GCCTCTGTGC AAAGGAGTGT GGCAACAGAT CCCACCTGTC AGGAAGACAA AATTGTCTCG 1320
CCCCATGACC AGAACCAGTC CCTTAGGCAA ACAGCTTGAG TTCTTGCAGA AAATCTTCCA 1380
GCTTCTTCCT GGGGCCAGCA CCAGTTCTTT CTCTCCTTTG TTACTCCATA TTGGCTTCAT 1440
TTCCCCCCAC TTCCCTTTCT CTGTGTGCAT TGAACTTCAC TCTGGTCAGG GAAGGAACCC 1500
ATGGCTCTCA GGAACAGAAA ATATCCCTTT TAGAGCTCAT AGTCACAAAT GAGCTAGCAC 1560
CTCAATCTAA AGAAGTTTCT CAAAGTGTGG TCTGTCCACT CCGTGTATCA GAATCAGTGA 1620
TGCTAAAAGT GCAGAGTCCA GGTTCTACCT GAATGTACTG ACACAGTATT TCTATGGGAA 1680
GCCTGGAATA TGCATTGTCA CAAGCATTCT GGATGGGAAT GAAGCCTGAG CCCCACTGCC 1740
TCACAACAGG GCCCCTTGTC CAGGTCTAGG ATATTTGAAT TACAGGCAAT 1790