EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-35231

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr8:29882590-29884080

Target genes

Number: 12
Name	Ensembl ID

RP11	ENSG00000253632
RPL17P33	ENSG00000243844
MAP2K1P1	ENSG00000254013
TMEM66	ENSG00000133872
LEPROTL1	ENSG00000104660
RPS15AP24	ENSG00000241511
MBOAT4	ENSG00000177669
DCTN6	ENSG00000104671
CTD	ENSG00000248159
TUBBP1	ENSG00000127589
RBPMS	ENSG00000157110
GTF2E2	ENSG00000197265

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrrg	MA0643.1	chr8:29883018-29883028	TCAAGGTCAT	+	6.02
RORA	MA0071.1	chr8:29883017-29883027	ATCAAGGTCA	+	6.02
STAT3	MA0144.2	chr8:29883707-29883718	CTTCTGGGAAG	+	6.14

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH08I030024

chr8

29882431

29883171

Enhancer Sequence

CTAAAGAAGG ATTAACAGTC TTCTCAAACT CTTCCAAAAA ATAGAAGAGA ACACTTATTA 60
ACTCTTTATA TGAAGCCAGT ATCACCCTGA TGCCAAAGCC AGGTAAAGAT ACTAGAAGAA 120
AACAAAACTA CAGATCAATA TATCTCATGA AGACTGATGA GAAAATTCTC AATAAAATAC 180
TACCAAATTG AATCTAGTAG CATAGTAAAA GGATTACACA CCATGACCAA GTTGGATTTA 240
TTCCAGGAAT GCAAGGATGA TTCAACATAT GGAAATAAAT CCATGTAATA CACCACATTA 300
ATAGAACAAA GGAGAGAAAA ACATGAAAAC TTCTTCATGC ATAAAAAGTA TTTGACAAAA 360
GCCAATACTC TTTCATTGAA AAAAAAATTT CAACAAACTA GGACTATAAG GGAACTTCCT 420
CAACCTGATC AAGGTCATCT ATTAAAAACC CACAGCTAAT ATCACACTTA CTGATGAAAT 480
AGTGAAGGTT TTTTTCCCTG AGATCTGGAA AATGACACAG ATGTCCACTC TCACCACTTC 540
TGTTTAACAT TGTGCTGGAA GTTCCAGCCC AGGCAATTAA GCAAGTAAAA CAATTAAAGC 600
CATCCAAATC TGAAAAGAAG AAGTAACCCT TTTTCAGATG AACTGATCTT ATATATAGAG 660
AGAGAGAGAA AACCCTAAGG AATACACAAT AAAATTTTTA GAGATAAGTG AATTCAGCAA 720
AGTGACAGAA TATAAGAACA ATACACAAAA ATCAGTTGTA CTTCAAGACA ACAGCGATGA 780
ACACTCTGAA AAGGAAATTA AGAAAATGAC TCCACTTACA ATATCATCCA AAATAATAAA 840
ATATCTAGGA ATAAATGTCA CCAAGGAGGG CAAAGACTTA TACACTGAAA ACCACAAAAC 900
ATTGCTGAAA AAAAATTAAA GAAGACCTAA ATAAATAGAA AAACATTTCA CTATCATAGA 960
TTAGAAGACA ATATTATTAA GATGGCAATT GTATTAGGCC ATTCTTAGAT TGCTATAAAG 1020
AAATAGCTGA GACTGCGTAA TTTGTAAAGA AAAGAGGCTT AATTGGCTCA TGGTTCTGCA 1080
GGCTGTACAG GAAGCACAGT GCTGCACATC TGCTCAGCTT CTGGGAAGGC TCAGGGAGCT 1140
TTTACTCATG GCAGAAGGTG AAGCAAGAGC AGGCACATCA CATGGTAAGA GCAAGAGCAA 1200
GAAGGTGAAG CAAGAGCAGG CACATCACAT GGCAAGAGCA AGAGCAAGAG AGTGTGTAGG 1260
GGAAGATGTC ACACACTTTT AAACAGTCAG ATCTTTCAAG TACTCACTCA CTACTGCATG 1320
GACAACACCA AGGGGATAGC ACTAAGCCAG TCATGAAAAA TCCACTCCCA TGATCCAGTC 1380
ACCTTCCACC TGGCCCCACC TCCAGCACTG GGGATTACAA TTCAACATGA GATTCTGGGG 1440
GAACAATATC CAAACTATAT CAGCAATGTT CCCCAAATTG ATCTACATAT 1490