EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-31614

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr6:42325200-42325890

Target genes

Number: 18
Name	Ensembl ID

TFEB	ENSG00000112561
PRICKLE4	ENSG00000124593
TOMM6	ENSG00000214736
MED20	ENSG00000124641
BYSL	ENSG00000112578
RP11	ENSG00000223946
CCND3	ENSG00000112576
TAF8	ENSG00000137413
C6orf132	ENSG00000188112
GUCA1B	ENSG00000112599
MRPS10	ENSG00000048544
TRERF1	ENSG00000124496
UBR2	ENSG00000024048
TBCC	ENSG00000124659
KIAA0240	ENSG00000112624
PEX6	ENSG00000124587
MEA1	ENSG00000124733
KLHDC3	ENSG00000124702

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_18609	chr6:42324982-42326050	CD4p_CD25-_Il17-_PMAstim_Th
SE_22772	chr6:42324967-42326261	CD8_primiary
SE_62934	chr6:42324918-42373292	Tonsil

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH06I042357

chr6

42325109

42325948

Enhancer Sequence

AGACAATAAC TGTAGGTGTT AGTGTGCCAC AGAATGGTCT TCTTTTTATT GAGAAAGCCA 60
CATCTGAGAT CACGTCCTTG TTTACAGGAG ACCCATGAAA CGTTAGAATT AGGACACCTT 120
TTGCCAGTCA AGGTGATGAG CATTAGGATA GTCCTGCAGG AAGGCAACCA ACTTGCTTTG 180
GCTCCAGGAT TCCATGATTC CATTCACAAT TTCACACGGG CGAGCGAGCA GTCTTTCTGT 240
CCCAGTCAAC AAGGACAGAG GGGTTACTTT CACACCAGTC ATGGCCTAAC ACAGAAGCTT 300
AATCCTGACT GGAAGGCAAA GTGTGTTTGT GGCAAAGCCA GGCAGACGTG TAATGAAAGC 360
AGAATGAGTA ATGTTTAGTT AAGCTTCTGG ATGGCAGGGG TGGTTGGGTG TATGTTTGGG 420
GATTTTTAAT GACTCCAAAA GGCGTCTTAA AAAGTCACAC TATTTTGGCA GTTCTGAGAT 480
GCAACTTTTG CTACAAGTAC TAACACCAGC AAGTGACTGC TACAAGTATT AATACTAGCA 540
CTTACCGGCA ACATTTCTCA CAAGCACCCC TTCCTTTCTG GGGCTCCTGG GATCAAACCA 600
AGTTTTCTGC ATATGTGGGG GGTTGGGGGT GGGGTTGGCA CACACACCCT TTCCCACCTA 660
CAGAGGCATA CCATACAACT GAAAGTCAGA 690