EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-25460

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr3:61941020-61942770

Target genes

Number: 1
Name	Ensembl ID

PTPRG

ENSG00000144724

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr3:61941722-61941743	AACCTGAAAATGAAAGAGCAT	-	6.15
MEOX2	MA0706.1	chr3:61941885-61941895	GTTAATTACT	-	6.02
PHOX2A	MA0713.1	chr3:61942246-61942257	TAATTCAATTA	+	6.14
Phox2b	MA0681.1	chr3:61942246-61942257	TAATTCAATTA	+	6.14

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I061955

chr3

61941541

61942873

Enhancer Sequence

TCCCACAGGA AGATAAAAAC CATTAGCTAA TGACAATGGT AATGTTTAAA TAGTTTTTAA 60
TTTTAAAATA ATATTTGTAA CCTGCAATGC TATGCTATCT CATTTTGGAC TTAGCGAAAA 120
TGTGTGAGCA TCTACAGAAA TGTATGTGAA TTAGGCTCCA GGAATAAAAT TGCATAAAAG 180
TACAACTGTG GCTTAAATCT ATTTATATGT ATGCTTGGAT CCTGAGCAAT ATAGATACCT 240
GGCTAGAAAC CTGGCTGTTC CATTATAACT GAATGTCAAA TTCCCCACAG TTAGTCATTA 300
TTAAAAATAC CCTTGTCTTA AATTTACTTT GGCACGGGAA TGTTCTTGGT GATTACCATA 360
CTGTGTTACT CTAGGGAGTT AAAGATTTAT ATTATGTTTC AGTTCTACTG AAATAATAGC 420
ATTCGTAGGC ACACAGATAT CTCTATGTGT ATACTGATAT ACTTGAGAAA GTTCTCCTTT 480
AACAACAGGT GATTTTAATA TTATCTGAAA AGAAATAAAA ATACTTTGTT TCATAGCACT 540
GTGGAGTGTC AACAGAAATC TTATTTGTTC TTTACTCCTA AAATAGGAGT ATAACACAAA 600
GTAATATGTT ATGCTCACTA AAGAACAGAA TCTCAATTTC AGAGATAGAA TTGCCAAGTT 660
CATTATTTCT GGAGAAAGGA ACAAATATTA ACCCCTTAGT TTAACCTGAA AATGAAAGAG 720
CATGTGGACT AAGGGGAAAA AAATTATATA TATATATATA TGAAAAATTG ACTTTTCTGT 780
CTTTTAGTTG TATGTCTTTA TCTCCAACAG ATATGTGATT ATCCTCCAGA GAGGACCATG 840
AGAATTTATT TTTAATTTTC ATTCCGTTAA TTACTTGTGT AACATATGTA TGTCCCCATA 900
ACAGCCAGTG CTCACTCGCG TGCACGCTGT CTCTCTCTCT CTCTCTCTCA CACACACACA 960
CACGCTTACT ACATATTCAT ACATTTATTC TACAGGGAAG AAGAGACAGT TGGAGACACT 1020
AATATTCCAG CTGTCGGCAG CAGAATCATT TCACAACCTT CTTCCCAGAA CTTTTGGTCA 1080
TTACTATTCT TGCCCCTCAG CCTCACTACT CACTGAAAAA ATATTTAATG TGGATCTAGT 1140
CAGTTCCAGT TTGGTTAGTT TAAAGAGATC CAGGAAGACT GAGCAATCAT TTACTAATCT 1200
GTATTCTAAA AAACCAGCTC AAGAATTAAT TCAATTAGAT ATGCCAGTCA CCATATCTGG 1260
AGATTAAAAG CAGGCAAACA GAAGGGAAAT AAGGAAAATG AAGCAGGGCA AATGGGACTA 1320
TTACTGATAT ATTAAAATGA AAGACTATAC TAAGACTTCT CATATGCGTA TATTGAGATT 1380
TTTCCTGCTG GCAATGATCA AGTACAATTA CATACCTTTT GTATGACATT TCTGATTGGA 1440
AAGGTTATGT GACATGCAGG GAGGGGTCTT AGTTATTGGC TCTTTAGCTA TTTCCCTCTT 1500
TATCCTGGAA TAGTACCACA GTGTGTTTTT CACTCCTTTA AAACATTCTT TAATGAAATT 1560
GCTTTGAGTC ATCCCTGTCT CTGTGCTTTG CCTCTTTTAT TCCATTGACT TGTTTAGGGT 1620
ACATAGGAAA TTAGGTTGAA AATGTGTTAG TATTCCACAT TAATATTAAC TTGAAGTCTT 1680
TCCCTTGTAT CACTAAATCA CTACAGATAA AAACTTGTAC TGTGAATGCA TGCTGCTTGT 1740
CTATAAATAT 1750