EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-25216

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr3:48454370-48454470

Target genes

Number: 23
Name	Ensembl ID

SMARCC1	ENSG00000173473
CTD	ENSG00000228638
FBXW12	ENSG00000164049
PLXNB1	ENSG00000164050
CCDC72	ENSG00000232112
CCDC51	ENSG00000164051
RP11	ENSG00000244380
ATRIP	ENSG00000164053
TREX1	ENSG00000213689
SHISA5	ENSG00000164054
PFKFB4	ENSG00000114268
UCN2	ENSG00000145040
COL7A1	ENSG00000114270
UQCRC1	ENSG00000010256
TMEM89	ENSG00000183396
SLC26A6	ENSG00000225697
CELSR3	ENSG00000008300
NCKIPSD	ENSG00000213672
IP6K2	ENSG00000068745
PRKAR2A	ENSG00000224424
ARIH2	ENSG00000177479
NDUFAF3	ENSG00000178057
IMPDH2	ENSG00000178035

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_01973	chr3:48453875-48457324	Aorta
SE_06034	chr3:48452581-48478282	Brain_Hippocampus_Middle
SE_26754	chr3:48454046-48456501	Esophagus
SE_54796	chr3:48454042-48457471	Stomach_Smooth_Muscle

Number: 1
ID	Chromosome	Start	End

GH03I048412

chr3

48453876

48458105

Enhancer Sequence

GTTAAGCAGA AGAGGCCAGG TTAAGCACCT GTTAAGCACC AATCCCGTGT GATGGGAGTG 60
GGTTTGGGCA GAGTTCTGGA GGGCGGGGCC CATTCTCCCA 100