EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-23715

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr21:44720790-44721840

Target genes

Number: 21
Name	Ensembl ID

WDR4	ENSG00000160193
NDUFV3	ENSG00000160194
U2AF1	ENSG00000160201
LINC00322	ENSG00000237864
AP001046.5	ENSG00000237989
SIK1	ENSG00000142178
AP001048.4	ENSG00000223975
LINC00313	ENSG00000185186
RPL31P1	ENSG00000214326
H2BFS	ENSG00000234289
HSF2BP	ENSG00000160207
RRP1B	ENSG00000160208
PDXK	ENSG00000160209
AP001052.9	ENSG00000241238
CSTB	ENSG00000160213
RRP1	ENSG00000160214
MYL6P1	ENSG00000226543
AGPAT3	ENSG00000160216
TRAPPC10	ENSG00000160218
H2AFZP1	ENSG00000213440
PWP2	ENSG00000241945

SNPs

Number: 2
ID	Chromosome	Position	Genome Version

rs79094191	chr21	44720890	hg19
rs112204826	chr21	44721027	hg19

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myod1	MA0499.1	chr21:44721522-44721535	AGTGACAGCTGCT	-	6.64
Myog	MA0500.1	chr21:44721525-44721536	GACAGCTGCTG	+	6.14
PAX5	MA0014.3	chr21:44720803-44720815	GAGCGTGACCCT	+	6.92
Tcf12	MA0521.1	chr21:44721525-44721536	GACAGCTGCTG	+	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_36645

chr21:44720362-44722034

HMEC

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH21I043300

chr21

44720808

44721725

Enhancer Sequence

ACTGAGGTGG CTGGAGCGTG ACCCTTTCCT GAGGGCAAAC AGGGAGGGCC TTGGAGCCCG 60
GCGCTCAGGA CAGGCCCCTG CTGGCCCGGC AGCCTGAGCT TCCACACTTT TCCAGGGCGT 120
CTCGAGTTCG CCCACAGAGC TGTTGTTTCA GGATAAAAAA TGCCCTTGTA TTCCACGTTC 180
CAGTTCAGAG GCCCGTCTGT TCCCAAGAGC GGAGGCGTCA GCCGCATGAG TCCCACCGGA 240
AGCCGGGTTG CCGGGTCCCC GTCCCTGCCC TGCAGACGAC GCATTCCGGA GCCCCCTTGG 300
GAAGCTGCCT GGCTCTCCCA GGCCTGGCTG CCTTCGCACG AGGGCTCCGA GGCATGCTCA 360
TCCTACGTGA CTGCCCGAGT GTGCACACGC CTGGCCGTGT GTGGGCGTGT GCCTGGGGCC 420
CGAGCTCAGG AGCAAGGCCT GCGTGGACCT GTTGTCTGAA ACAAGCCAGT AGACAGCTGC 480
GTCAATGCAG GCAAGCTGAA CAGGGCTGCT TTTTCAGCCT GACAACCCCA GGGGCTGAAC 540
AGGAGCTGGG GGAGGAGCAA GGGGCCGTTC CCCTGCCCCA CAGCACAGCA CACGACCCCG 600
CCTTGGAACC TGGGGCCCGG GGTGAATCGA GGGTCCTGGA GCAAGAGGGG CTGCTCCACA 660
GGAGAGCCTG TCCCGCCACC CCTCAGCCAC CAGATTCGGG GCTGCTGGAC TTGTTCTCAA 720
ACCTGCACAG TGAGTGACAG CTGCTGAGAC GGAGGTCTCA GGCAGTGCAG GTGAATCAGC 780
ATGGACCATG GCGAGCCCGC CTTCATCCTT CTCCTGGGAG GACTCGTTCC TTAGAAGCGA 840
ACGGGGGCCT CCTCACCAGG GAAATAAAAA CCAAGCAAGG GGAAAGCACG GAATGTGTGG 900
AGCTTCCTGG GAGCCTTCTT CTGAGGCTGA AAGTGGCTCC CTGCCTGAGT TGGTCCATGC 960
GGGAATCACA GGGAGATGGT GGCTGGGCCT GTCAGGACCT TTCAGCCCAC CTGGTGGACG 1020
GGGGTCCATG AGGGTGGTGG GGGTGCAGGC 1050