| Tag | Content |
|---|
EnhancerAtlas ID | HS129-22534 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr20:38907590-38909280 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| ESRRB | MA0141.3 | chr20:38908781-38908792 | TCAAGGTCATA | + | 6.62 | | Esrrg | MA0643.1 | chr20:38908781-38908791 | TCAAGGTCAT | + | 6.02 | | NFE2L1 | MA0089.2 | chr20:38908277-38908292 | GAGTGACTCAGCACT | + | 6.65 | | NFYA | MA0060.3 | chr20:38907898-38907909 | TCTGATTGGCC | - | 6.02 | | Nfe2l2 | MA0150.2 | chr20:38908275-38908290 | GTGAGTGACTCAGCA | + | 6.08 | | Nkx3-2 | MA0122.3 | chr20:38908683-38908696 | ATATCCACTTAAA | + | 6.41 | | RORA | MA0071.1 | chr20:38908780-38908790 | ATCAAGGTCA | + | 6.02 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I040278 | chr20 | 38907242 | 38908830 |
|
Enhancer Sequence | AGGGTTATGT CAGACCTGCC CTGGCTGGGC CTGGGTCTCG CAAGCTGCCC AGATGATCCC 60
AGGGTCCCCA ATGGGGGTAG CTTAGTAAAT ACCACAATTC AGAGATGTCT CAAATTGTGG 120
AAGGGAAAAT TAACTCAGTG GCTGTATATC AAAAGGCAAG TGGCCATTCA TCAATAAAAG 180
GCATTAGTTA CTTAGCCTTT CAAGAAAAAC GAGCCACCAA TACCTACAAG AGAGAAGCCT 240
AAGAACAAAT AACCTCTAAG TCCAAATGGG GCACTTCATC ATCCAGCTTT TCCCTCTACC 300
TGTAGATTTC TGATTGGCCT CTCTACCACT TTTATTGCCT CAACTCAAAC TTATTTTCAT 360
GTGATGGAGA GTCAAGGCTT CAGGGTTTCA GGGCCATGTG TCTATTACTT TACTGTTTAC 420
TGAGAGATAA CAGCTGAAAG AACTCTTGCA TTTTTAGAAT TGGATTTCTT TTTTTGTTTT 480
TTCTTTCATA ACAGCAGGCT TCTGCTCTGT TTGGCTCTAT CTGGTTGTGT CTGGTCATGC 540
TCTGTCCTCT GCAGTAACTT CCCTGCTTTA GTTCTCCTTC TCCTTTCCGG AGCCAGTCCC 600
TTCCAGCTTC TCCTCTGGTT ATTCTAGTGG AGCCCCATGA TGTCTGTTCC AGCTGTTTAT 660
AATTACCTCC CTCAGGCTGC TTGGGGTGAG TGACTCAGCA CTCTGCCTTG TTTTTTGTTT 720
CTTTCCTTTT TTTTTTTTTT TTTTTAAGAA GCCAGATATT TGTTTAACAT AGTCCATCCA 780
ATATCACAGC CACTAAATGC TCATTTCTGG TTCCCAGATC TAAACAGCAC CTACAGTTCT 840
CAAGTCACTT TGTATAAATA GGTTAGATTT TGAAAGTAGA AGTAACTGGA CCTGAATTCC 900
ACCTCCAGCC TTTTGTGCCT GTCTCTTAGC CTCTCTGAGT CTGTTTTCTC ATCTCTAAAT 960
AGGGGCCATG GCATGTGTTC ACAAAGTTAT TTTGGAGATA AAGTGAGACA ATGAACAGAA 1020
AAGGCCGAAT GCAGTGCTCA CCCACTATTT TTTTTTCTCC AAACATAAGC ATATTATTTC 1080
TCTTTTGTTT CAGATATCCA CTTAAAAATT ACATCTTATA ACTTATTCCT TCTAATCGCC 1140
TCTTGTATGC TCCCACTTCT CTTCCATTTC TATTACTTTA CTCCTATTAA ATCAAGGTCA 1200
TAATGCTTAT TTCTGAACAT GTGCAGTAAT GCCCAAGTGG TTTTTTAGCT TCTGATCTTT 1260
GACTTTTTGA CATCAAATTA ATCTTCTAAA TTGTACATTC TTTTCTTTTC TTTTTTTTTA 1320
GACAGAGTCT CACTCTGTCA CCCAGGCTGA AGTGCAGTGG CACGATCTCG GCTCACTGCA 1380
ACCTCTGCCT GCCAGTTCAA GCAATTCTCC CACCTCAGCC TCCCAAATAG CTGGGACTAC 1440
AGGCATGCAC CGCCACCACA CCTGGCTCAG TTTTTGTATT TTTTGTTAGA GATGGATTTT 1500
CGCCATGTTG GCCAGACTGG TCTCAAACTC CTGACCTCAA GTAATCTGCC CGCCTTGGCC 1560
TCCCAAAGTG CTAGGATTAC AGGCATGAAC CACCACCACA CCGGGCTTAA TTGTACATTC 1620
TATCCCTGCT CCACTATCAG TACCTAGCCT TCCCTGGTTG CTTTCAGCTG CAGGTCTGAG 1680
TTTTGCCCCT 1690
|
