| Tag | Content |
|---|
EnhancerAtlas ID | HS129-17446 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr19:2522490-2524120 |
SNPs | | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nr2f6(var.2) | MA0728.1 | chr19:2522546-2522561 | CGGGTCACAAGGTCA | + | 6 | | Zfx | MA0146.2 | chr19:2522532-2522546 | GAGGCCGAGGCGGG | - | 6.01 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_02772 | chr19:2523117-2525971 | Astrocytes | | SE_27574 | chr19:2523671-2524242 | Esophagus | | SE_37152 | chr19:2521543-2526056 | HSMMtube | | SE_44559 | chr19:2523347-2525950 | NHDF-Ad | | SE_45404 | chr19:2523503-2524617 | NHLF | | SE_52142 | chr19:2523234-2525735 | Skeletal_Muscle_Myoblast | | SE_63981 | chr19:2523234-2525773 | HSMM |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I002522 | chr19 | 2522984 | 2525926 |
|
Enhancer Sequence | GGCCGGGCGC GGTGGCTCAC GCCTGTAATC CCAGCACTTT GGGAGGCCGA GGCGGGCGGG 60
TCACAAGGTC AGGAGATCAA GACCATCCTG GCTAACACGG TGAAACCCCG TCTCCCGGGC 120
GTGGTGGCGG GTGCCTGTAG TCCCAGCTAC TCGGGAGGCT GAGGCAGGAG AATGGGGTGA 180
ACCCGGAAGG CGGAGCTTGC AGTGAGCAGA GATCACGCCA CTGCACTCCA GCCTGGGGGA 240
CAGAGTGAGA CTCTGTCTCA AAAAAAAAAA AAAAAAAAAA AAAAAAAGAA GGAAAGGACC 300
ATCCATGCAT ACCACACCGC AGGGGAATCT CCAGGGCCTG GGATGTGTAG CATGCTTCTG 360
TTTGTGTAAT GTGTTTAAGA GGACTTTTTT TAGACAGAGT CTCGCTCTGT TGCCCAGGCT 420
GGAGTGCAGT GGCATGATCT CAGCTCACTG CAAGCTCCGC TTCTCCAGCT CCAGCGATAC 480
TCTCACTTCT GCCTCCTGAG TAGCTGGGAT TACAGGTGCA TGTGCCACCA TGCCTGGCTA 540
ATCTTTGTAT TTTTGGTAGA GACATGGTTT TACCATGTTG GCCAGGCTGG TCTCAAACTC 600
CTGGCCTCAA GTGATCTGCC TGTCTCGACC TCCCAAAGTG CTGGGATTAC AGGCATGAGC 660
CACCATGCCC GGCCCAAGGA CGAAATTTTA GAAATGGAGA ACAGATTAGC GGCTGCCAGG 720
GATCAGGGAG GGGCAGGGGC TGGGAGGGAG ATAGGTCTCT GTATAAAAGG GCAACACAGC 780
CAGGCATGGT GGCTCTTGCC TGTAATACCA GCACTTTGGG AGGCTGAGAT GCGAGGATCA 840
CTTGAGTCCA GGAGTTTGAG GCCAGCCTAG GCAACATAGC AAGACCCCCT CTCTACAAAA 900
AATTAGAAAA TTAGCTGGGC ATGGGTAGCG CACTCCTGTG GTCCCAGCTA CTTGGGAGGC 960
TGAGGTGGGA GGATCACTTG AGCCTGGGAG GTTGAGGCCA GACTGGGCAA TTTAGTGAGA 1020
CCCCATCTCT GAATAAATAA TAAAAGGGCA ACACGAATGA TCCCTGTTAG TGCCTCAACT 1080
ACGGTGATGA ATCCACAAGC CTACATGAGT GATAAACTCA CAGAGAGCCT CACACACTCA 1140
CACACCAGCG GGCACAATAC TGAATACTGT GGAACCTGAG TGAGGCTGGT GGGTGTGTGA 1200
CTGTCTGGCT GCGATCCTGC CCATAGCTTT ACCAAATGTT ACCACCAGGG ACGGCCGGGG 1260
AATGACACAC AGAATTCCTC TACATTCTTT GTTAGCACTG GCTGTGACTC CACGGCGATC 1320
TCAATAAAAG GGGCAATTAA ACAAAAAATC CCTTTGACAC CGCCCAGCCT CCTTGGTTTC 1380
CAGCAGACGT CCCACCCCCA CTTTTTGGGG GCAGAGAAGG CCCAATCTGT CTGCTCTGGA 1440
GGCAGAGCCC ACGTGTGGCC GCTCAGAGGG CTCTGATTCC AGAGAGCTTC AAAGCAGCCA 1500
CAAAACATCC AACTCAGGGA AAACCGCCCT TGGTTGGGCT TAAAAATACC TAAATTACTC 1560
AGTGCTAAAA ATACGTGCAC GCAGAGAACA AACGGGCTGG CCGCACCTCC TGTTTTCCTT 1620
GGAAGGCCAG 1630
|
