Tag | Content |
---|
EnhancerAtlas ID | HS129-16826 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr18:20722860-20724350 |
Target genes | |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr18:20723113-20723134 | TCCTTGTTTCAGTTTCCACTT | + | 6.14 | SOX10 | MA0442.2 | chr18:20724334-20724345 | GTCTTTGTTTT | - | 6.14 |
|
| Number of super-enhancer constituents: 2 | ID | Coordinate | Tissue/cell |
SE_47381 | chr18:20720461-20725099 | Panc1 | SE_61169 | chr18:20705875-20723336 | HBL1 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH18I023139 | chr18 | 20719530 | 20724890 |
|
Enhancer Sequence | GCAGGCATTA TTCTAAGCAC TTTGATGGGA CTGAGTTCAT ACCTAGAAAC ACCCTGAGAC 60 AGTACTACCT TCACCTCCAT TTGGAAGCAC AGAGAAGTTA AGTAACTTGT CTGGGGTCCT 120 GTGCTCTGAC CCACCTCCCT CTGCTGTGCT ACAATTTACA GGTCAGGCTC ATGCATGCTT 180 GTTAAATAGG CTTCAGCTGA ACTGAGCAGA AGTTGACCTA AATGGCCTCA AGGGTTCCCG 240 ATCACTTGTG ATTTCCTTGT TTCAGTTTCC ACTTTTCTGT CATCTAGGGA AGACCTCTGT 300 GCATTTGGGC CCAGAGGACA GGCCAGGTTT TAAATAGGGA TTCCTGTGAC TCTGGCAATT 360 AACTCCCGCC CTCTGCCTGC CTGTGCTTCC TCTCTTCTTG GCCACAGCTG AATCCCTGAC 420 ACCTTTATTG CCTCTCTGAC TCACCTGGTA CATTACACAT CTTGTGTTAT ATAGAGCATG 480 GTACAATTAG CAACAGGAAC CTGGCCTCCT AAAGTTTAAA GCTCTGCTGG GTCCTCGTCT 540 GTGAAATGGG AATGATACTA CCACCTCCGC CCTGGGCGGG TTTCCCGCTG TATCTTCTCA 600 GCATCACCCT TTCCCCAACT GCCCCTCTGG CTGTTTATAA ATAATACTTT CTTGGAAAAA 660 CCACACCCAC TCGTGCAAGT CTTGCCTTTG GCTGCCTTTG TGCTACAAGG ACAGAATCGA 720 GTAGTTGCGA CAGAGACCAC ATGGCCTATT CCCTGGCTTG TCACAGAGTG GTTGTGCTTC 780 CCCCACCCTA GCCCAGTGCT CTGTGCCCAG GAAGTGTGCA GGTCCCCTTG GCCCCTTCCT 840 GCCTGCCTGC ACCCTCCTTG CCTTGTTTCA CAGCCTGGAT AATGTGGTGG CCCGAGGGGC 900 TCCTGGCTTC TGTTTGGACC CCTGTCAATC CCTCCCCCCC TGGGCTGTCA GAGGGACCCT 960 TCTGAAACCC ACATCTGATC CTGCCAGTCT TAAATTCCTG GTATTTCAGG CGAGGCAGCT 1020 GTTGGCTTGG GTCCTGGTTG CCACTGCAAC CTCCCCCGCT CCCACACACC CTCTGAGGCC 1080 TGTTGCTGCC ATACTGTGTT GTCTTTACAG AGGGCACCCA CGCTGCTCCG TGCCCCAGGC 1140 TCTGGCACTC TCAGGCTTCT CCTGGGGCAA GGCCTCCCAC AAGAGGCCCC TTCCTTCCAG 1200 CTCCGTCAGC CACAGAGCCA GCCGCTGCTC TCCCCATGCT CGTACACGCT CCTGGCTGGG 1260 CCTCTTCCTT CCCTGTGGAT CTGTGCTTCA GCCCTGGTCT GACTGGAGGG CCCCTCCTCC 1320 GTGGTCTGGT CAGAGCTTGA TGGATTGCCC TGGGGCCAGC TTTTGGTGGA ACAGACCACA 1380 TCTCTCCTCC ATAGGGAACA CAAATGAAAC TCCAATTCCC TAACAGTAAG AGGAGGAAAA 1440 TTTGATTCTG TTCCCCCACC CCACAACGTT CTAGGTCTTT GTTTTCATCC 1490
|