Tag | Content |
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EnhancerAtlas ID | HS129-15038 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr17:198210-201710 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HNF1A | MA0046.2 | chr17:199474-199489 | TGTTAAAAATTAACT | + | 6.12 | HSF1 | MA0486.2 | chr17:200724-200737 | TTCCAGAACATTC | + | 6.62 | Klf1 | MA0493.1 | chr17:201168-201179 | GGCCACACCCT | + | 6.32 | LMX1B | MA0703.2 | chr17:199498-199509 | AATTTAATTAA | + | 6.32 | LMX1B | MA0703.2 | chr17:199501-199512 | TTAATTAAAAT | - | 6.62 | MYCN | MA0104.4 | chr17:198569-198581 | CACCACGTGGCC | + | 6.07 | MYCN | MA0104.4 | chr17:198569-198581 | CACCACGTGGCC | - | 6.07 | Nr2f6(var.2) | MA0728.1 | chr17:200184-200199 | GAGGTCAAGAGATCA | + | 7.23 | mix-a | MA0621.1 | chr17:199486-199497 | ACTAATTAATT | - | 6.62 |
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| Number of super-enhancer constituents: 19 | ID | Coordinate | Tissue/cell |
SE_01370 | chr17:198387-199468 | Adrenal_Gland | SE_01370 | chr17:199622-200099 | Adrenal_Gland | SE_01370 | chr17:200569-201528 | Adrenal_Gland | SE_24263 | chr17:198458-199396 | Colon_Crypt_2 | SE_24263 | chr17:199580-200193 | Colon_Crypt_2 | SE_24263 | chr17:200212-201513 | Colon_Crypt_2 | SE_32201 | chr17:198362-204105 | Gastric | SE_42873 | chr17:198283-199471 | Lung | SE_42873 | chr17:199514-205679 | Lung | SE_46897 | chr17:200550-201117 | Ovary | SE_47556 | chr17:198502-199395 | Pancreas | SE_47556 | chr17:199541-200127 | Pancreas | SE_47556 | chr17:200502-204004 | Pancreas | SE_50797 | chr17:198331-199474 | Sigmoid_Colon | SE_50797 | chr17:199495-203870 | Sigmoid_Colon | SE_53038 | chr17:197812-204142 | Small_Intestine | SE_53705 | chr17:196970-203670 | Spleen | SE_65261 | chr17:198629-199530 | Pancreatic_islets | SE_65261 | chr17:199592-205672 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 6 | Chromosome | Start | End |
chr17 | 199561 | 201435 | chr17 | 198472 | 198837 | chr17 | 198482 | 199270 | chr17 | 198584 | 199318 | chr17 | 200332 | 201485 | chr17 | 200517 | 200885 |
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| Number: 1 | ID | Chromosome | Start | End |
GH17I000349 | chr17 | 197819 | 198290 |
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Enhancer Sequence | CAAATGTACC TCACCAAAGC AAGATGTTAA TCATGGGAAA TTGAAAGAGG TAAGAGGTTA 60 GACGGGAACT CTGTACTTTT TGTTCAATTT TTTCTGTAAA CCTAACACTG TTCAAGAAAA 120 AAAAAAAAAA GTAAAGTGCT ACCAAATGCA ATGAAAAAAA TTTTAATTTT CTTCTTCATA 180 GAGAAAACAA AAATAGCACA CTAATGGTCA TCAATGCGGA AGAATCTTGC CACGCCACTA 240 ATATTACATT TGAGTGTTAT ACCCTCCCGA ATGCTTTTGT GTGGACTAAT CACAGGCGCC 300 CATCATCCCT GTTTGCTAAA GGAGGAAGGT ACGTACTGTC CATGCCTGTG TTCCATCCCC 360 ACCACGTGGC CCTCCCTTGG GAGTGCAGAA CACTGAAAGG TCAACAAATA CTGGGCCCCA 420 GTTCTTTCTT CACCACATGC ATCACAGTTG GAATCTGTGT TTATTTCTTT GTTTACGTGT 480 TAATCTCTGG AAGGTGCACG GGGAGAAGGG TCACCTCCAT TGTGCTGGCT CTGAAGAGCC 540 ACTGCATATT GCACAGTGCA CGAGATGAAT CCAAAATGAA TCAGACAGCG GCTCCAATAA 600 ATGCTGAGGC CATGCAAAGA ACACTGGGAG TGAAGAGAAG GCGCAGTGAA GATCTTGCTC 660 TGTGGCAGTC CTGGAGGGCT TCAAAGAGAA GAATGTGGTG CAGGGCTCAG AGGGAAAAGG 720 AGGGACTTGG CAGGCAGAAG GCGGCATTCC AGGGAGAGAA TGGTCCTCCC AGAAGTGCCA 780 CAAAGGAAGA GGAAACTCAC TCAGAGAACT AGGGTAATTG GGCAGGAGGG AAACTCGCCT 840 GGGCAGGTTA GTGACTGCCC TGAGGTCACA GCTCGCTGGC ACCAACTTGG GCAGAGCTGG 900 GAACTCCGAA GCTGTAGAAA CAGCCAAGTG CACCTTGAGC TTTCACTGAA GTCAGGCTGA 960 GAAGAGAGGA AAGTGAACAC ACCCTCCCCA TTTCACCCAC ATCTCCCAAC ATCCAGGGGC 1020 CAGGAGCGTG CCCAGAAATT ACCAGCTCAA ACTCAAAACG GCTCTAAGGT TAAATGCACG 1080 TTCTATCCCA CCACATATTG ATTATTTCAA AAATTAAAAT GACTGGGCAC AGTGGACCAT 1140 GCCTGTAATC CCAACACTTT GGGAGGCCAA GGTGGGAGGA TTGCTTGAGG CCAGGAGTTC 1200 GAGACCAACC TGGGCAATGT AGCAAGACCC CATCTCTATA AAAAAACTTT TTAATAAAAA 1260 TAAATGTTAA AAATTAACTA ATTAATTCAA TTTAATTAAA ATAATGCTTC TCCTCCACCT 1320 TAAGACATAA CCTTCCAAAA ATGTCTTCCA GTAAAATCGA GTCCAGGATT ATGCAACTCT 1380 AGTTTTATGT AGTAATAGCA GCAGCAGCTG ACATTTCTGT AACACCTTAT CTATATCATC 1440 ACTCACAATC TCCACTGCAA TCCCATCGAG GGCCATCAGC ACCCTGATAT TACTGCTGTG 1500 CCCAGCACAC CACAGGGACA GCACACACCC ACACAGAGGA GCACAGAGGC CAATTAGATT 1560 CCTCCAAGTT AAATAGTGTG TCCACAGTCT CACTACTGCA GATGCGATCT CCCTTTCAGA 1620 GGTGTAGGTT TGCAATTGGA CTCTACAGCT AACCAGCGGT TTAATTTGGG GCTTGTTACA 1680 TTTCCCTACA CTCCATTTCT TCCTCTGTAC AACAGAGGTA ATAAGTAATG CATTCCTCAA 1740 CAGGTTTTTT CCAGAGTGAA TTGTGGTAAC AGAGTAAAAG TTCCAGGCTG GGCGCGGTGG 1800 CTCACGCCTG TAATCCTAGC ACTTTGGGAG GCTGAGGCAG ACGGATCACA ACATTGAGAC 1860 CAGCCTGGCC AACATAGTTA AACCTCATCT CTACTAAAAA TACAAAAATT ATCTGGACGT 1920 GGTGGCACGC ACTTGTAATC CAAGCACTTT GGGAGGCCGA GGTGGGCAGA TCATGAGGTC 1980 AAGAGATCAA GACCAGCCTG GCCAACATGG GTGAAACACC ATCTCCACTA AAAATACAAA 2040 AATTAGCTGG GCATGGTGGT GCATGCCTGT AATCCCAGCT ACTCAGGAGG CTGAGGCAGG 2100 GGAATCGCTT GAACCGAGGA GGCGGAGGTT GCAGTGAGCC GAGATCGCAC CAGTGCACTC 2160 TAGCTGGTGA CAGAGCAAGA CCCCATCTCA AAAAAAGAAA AAAAAGTTCC AAACACAGTA 2220 TCTGGTACCT AGCAGGCCCT CACAAAACAA AACAAAACAA ACCCGTTTTT TAAACCAAGC 2280 TGGTCCCTGA ATGCTGGTGA ACTTCTCTGC ACTAAAAGGA TGAAATGGGA ATTAAAAAAA 2340 CTGTGACCCT CTGACCGCAG GCCCTGATGA TGGATGAAAT CTTGGCCTGG GCTGTCAGCC 2400 AAGGCCATCT GGGCCAAACC ATAGGGCAGG AAACAGCAGG CTTCCTCCTC CTGTCTGAAC 2460 TCTGGCCCAG AGAGGAGCTT CCTTCAGCTG GCCGCACCCA CTTCCCCGAC AACATTCCAG 2520 AACATTCCAT GATAGGCCAG GAGACTCCAG GAAGAGGTCA CTGAGTAGCT CTTAGCATCT 2580 CCTCCCAGCC CAGCCAGGAG AAGATGCTCC CCCCTTCTAG GACTCCATGT ACAACTTCTG 2640 AACTGTACCC CTGCCCATCA CCCACGGCCT CCCCACAGAG GGCCAAGGCT CAGCTTGTCC 2700 ACCTCCGACC TACCTCTCTC CAACGTCTCT AGGCTGCCCC CCAAGCCAGT AAGAGATGTC 2760 CTGGGTGGCT GGGTTGCTTG TCCTTGGCTA TGGCCCTAGT TTGGCTTCTT AAACCCTCTT 2820 TACCTGGGCC CTTAACTGGT CATCTGCCTC CAGTCCTGGT ATCCACTACA CATAAACGAG 2880 ACTCTTCAAG GACTGTCAAG AAACACTCCC CTCCTCAAGC ACCCTCAATA GCTCCCACTG 2940 CCTCCTGAAA AGTTCAGAGG CCACACCCTG AGACTGACGG TCCTCCACAA TATAGTCCCA 3000 CACCTACCCT CTGTTCCCTA CAGGACTCAC CTGCTGCAAC CAAAATAGAT TACACCAAGA 3060 ATCGTACCCA CATGTCTGGA CCTGTAAGTA CAGACCCACC TCCCATCTCC ACCTAGCTGA 3120 GTCTCACTCC TCCTGCACCC CGCCTGTCTC TTCCATGAGC CTCTCTTTTT CTTGTCTCTG 3180 AATTCCTCCA GCATGCAATT TCCAAAGCAC AGGCCTCCAC ACGCCACCAG CCATCCCCAC 3240 GTGGCTCCCG TACGATTCTT TACTTAATAT TTCCCTTTAA ATCAACCCAC TCTTTTACTT 3300 GAACAAATTT ATTTTCAAAG GAAACTGTAT ATCTCCACCA TAAATAGAAA AACCATGCCA 3360 TATGCCACAA ATAGAAGGCA GATGAAAAAA AACAAGTTAT GCTCTAATAC ACATGAAAAT 3420 AAATCATCAG GAAAACATTT TTAAATGCTT GTCCATGTGC CTGACGAGGT AAACCTATAT 3480 ACAGGTTGTA AATGGAACAG 3500
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