EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-14981

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr16:88896060-88898400

Target genes

Number: 20
Name	Ensembl ID

ZNF469	ENSG00000225614
ZFPM1	ENSG00000179588
RP11	ENSG00000261744
ZC3H18	ENSG00000158545
IL17C	ENSG00000124391
CYBA	ENSG00000051523
MVD	ENSG00000167508
RP5	ENSG00000260630
SNAI3	ENSG00000185669
RNF166	ENSG00000158717
CTU2	ENSG00000174177
PIEZO1	ENSG00000103335
CDT1	ENSG00000167513
APRT	ENSG00000198931
TRAPPC2L	ENSG00000167515
GALNS	ENSG00000141012
PABPN1L	ENSG00000205022
ACSF3	ENSG00000176715
CTD	ENSG00000261546
SPG7	ENSG00000197912

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs73252814

chr16

88897349

hg19

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr16:88898282-88898303	GGAGGAGAGCGGTGAGGATGA	+	6.02
Zfx	MA0146.2	chr16:88896400-88896414	GAGGCCGAGGCGGG	-	6.01

Enhancer Sequence

GTGCAGGATC CACAGCCAGG CGCCTGCTCC CACCTCTGCT CCCTAGTAAT TGGGGGACCC 60
TGACAGACGA CTTCCTCTCT GGCCTCAGTT TCCTGATGTG TAGAATGAGT GGGGAAGAGG 120
AGGATCTGGC AGAACAGCAG CCAATCCCTG GGCCTTCAGG CGCGCGACCA GGCCAGGCAA 180
TTGAGGCGGC AGACACAACG CAGGCCGCTC ATCAGCGAGG CTCGAAACAG GGAGGCCAGC 240
CTGGGTGAGC AGGGGGTGGG GTGGGACACA GCCACAGGGT CCTCAAAAGT GGAACAGGCG 300
CCGGGCGCGG TGGCTCACGC CTGTAATCCC AACACTTTCG GAGGCCGAGG CGGGCAGATC 360
ACGAGGTCAG GAGATTGAGA CCATACTGGC CAACATAGTG AAACTCCGTC TCTACTAAAA 420
ATACAAAAAT TAGCCGGGCA TGGTAGAGCA TGCCTGTAGT CCCAGCTACT CGGGAGGCTG 480
AGGCAGGAGA ATCGCTTGAA TCTGGGAGGT AGAAGTTGCA GTGAGCCGAG ATTGCACTAC 540
TGCACTCCAG CCTGGGCAAC AGAGTGAGAC TTCATCTCAA AAAAAAAAAA AAAAAAAAAA 600
AAAACGTGGA ACAGGAAGGC CAGGGACAGA TGCCTGCGTG CTGCTGGCTT TGACGGTGGA 660
GGGGCCAGGA GCTCAGGAAT GGGGCAGCTA CTAGGATTGG GAAAAGGCAG GGAACAGAAC 720
ATCTCCTGGA GCCTCCAGAA GGAGCTGGCC CCACGCACGT CTTCACTCAG CCCCATGAGC 780
CCCATGTTGA CTCTGGCTGT CGTCATGTGT GATGTTCCAG CTGCCACTGG GAGCCCCCCC 840
CATCCTCGTG GGGCCACTTG AAGGGGATGG CTGCCTCTGG AGGCCATTGG GAGGGCAAAA 900
GACTAAGAAA CAGTGAAGAA ACAGCGGTCG TTTACAAACA CCAGACTCAG CCCCGCGTGT 960
TGATGGGTAT GTCTGGCTCA AGTGCCTGTT ACAGAAGACC ACACGGTGTG ATTCTCAACC 1020
GAGGGGCAGC TTCCTGGGCC AGAGGAGATG CAGTGACAGC ATGAAGGTGG TCACACTGAG 1080
ATGGCAGGGC GCACCCTCGC CCAGCCAGGA CCCAGGCCAC CACCGAGGTC CGCACCCCAT 1140
GCGGCAGACA GACACCAACG GTCTCGTGTC GGGCTGCTGC TGTTCTCTGA GTGTCCTTAG 1200
GACACTGGCC TGAGAAGATG TGCTTTGGGG GAAAAAACGA CCGATTCTGT AGTAGACAGA 1260
CAGGTTTTTA AACACTCAGC CTGCTCTAAG CCCCTTCTAG AAGCTCATGG TGCCCACCAG 1320
CATGCTAAAG GCACTGATAA GTCCTGCAGG GAAGAAACCT GTTTAGCTCC ATTTAACTCA 1380
GGACTGCTGC GGTGACTGGA CCACGGATGT CTCCTCACCA CACAGTCATT ACCAGCACCC 1440
ACGTGACACA CGGCAGTATA CGTGGCTCCA GTCCCCACCG AGAGCCTTCC TGCCTGTCTG 1500
ACCAAGCACA GCAAGCCCTA CACACCGAGA GCCACCGAGA GGGACCTGGT TCCGAGGAGA 1560
GCGGTGAGGC CGAGCACGGG GTGCGTGGGG AGGAGAGCGG TGAGGCCGAG CACGGGGTGC 1620
GTGGGGAGGA GAGCGGTGAG GCCGAGCACG GGGTGCGTGG GGAGGAGAGC GGTGAGGCCG 1680
AGCACGGGGA GCGTGGGGAG GAGAGCGGTG AGGCCGAGCA CGGGGTGCGT GGGGAGGAGA 1740
GCGGTGAGGC CGAGCACGGG GTGCGTGGGG AGGAGAGCGG TGAGGCCGAG CACGGGGTGC 1800
GTGGGGAGGA GAGCGGTGAG GCCGAGCACG GGGTGCGTGG GGAGGAGAGC GGTGAGGCCG 1860
AGCACGGGGT GCGTGGGGAG GAGAGCGGTG AGGCCGAGCA CGGGGTGCGT GGGGAGGAGA 1920
GCGGTGAGGC CGAGCACGGG GTGCGTGGGG AGGAGAGCGG TGAGGCCGAG CACGGGGAGC 1980
GTGGGGAGGA GAGCGGTGAG GCCGAGCACG GGGTGCGTGG GGAGGAGAGC GGTGAGGCCG 2040
AGCACGGGGT GCGTGGGGAG GAGAGCGGTG AGGCCGAGCA CGGGGTGCGT GGGGAGGAGA 2100
GCGGTGAGGC CGAGCACGGG GTGCGTGGGG AGGAGAGCGG TGAGGCCGAG CACGGGGAGC 2160
GTGGGGAGGA GGGTGGTGAG GCTGAGCATG GGGTGCGTGG AGGCTGAGCA CAGGGTGCGT 2220
GGGGAGGAGA GCGGTGAGGA TGAGCACGGG GTGCATGGGG GAGGTGGCCA GTGAGGGGCG 2280
CACACACCCT GGGATGGCTG CAGGCCTGGA CCTGCTGCCC GGCAGACCGG TGGACGCTGA 2340