EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-14527

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr16:66784530-66785170

Target genes

Number: 29
Name	Ensembl ID

CTD	ENSG00000246898
BEAN1	ENSG00000166546
RP11	ENSG00000260755
TK2	ENSG00000166548
CKLF	ENSG00000217555
CMTM1	ENSG00000089505
CMTM2	ENSG00000140932
CMTM3	ENSG00000140931
CMTM4	ENSG00000183723
DYNC1LI2	ENSG00000135720
CCDC79	ENSG00000249961
NAE1	ENSG00000159593
CDH16	ENSG00000166589
RRAD	ENSG00000166592
FAM96B	ENSG00000166595
CES2	ENSG00000172831
CES4A	ENSG00000172824
CBFB	ENSG00000067955
C16orf70	ENSG00000125149
B3GNT9	ENSG00000237172
FBXL8	ENSG00000135722
TRADD	ENSG00000102871
HSF4	ENSG00000102878
KIAA0895L	ENSG00000196123
E2F4	ENSG00000205250
ELMO3	ENSG00000102890
TMEM208	ENSG00000168701
FHOD1	ENSG00000135723
7SK	ENSG00000201201

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_04627	chr16:66782948-66787049	Brain_Anterior_Caudate
SE_05519	chr16:66782336-66786917	Brain_Cingulate_Gyrus
SE_08424	chr16:66782551-66787274	Brain_Inferior_Temporal_Lobe

Enhancer Sequence

GAGATTCTTC TATAGTGTTT AAGAGTCGCC TATGCTGAGC CTGTGCCCAG CCCACAGGTC 60
CCAAGCAACA AATGGACTTG CTGTGTGAAT GTACCCAAAC TCCCTCACTT GAGGAGAGTG 120
AGGCCAGAGG GAGTAAGGGA CCTGACTCAG GTAACCTAGC AGTGAGGGCT AGCATAATGG 180
AGGAAACGTC CCCAGTGCTG ACTCTCTGTC CTCTGCAAAG TCCCTAAAAC CTCGGACTAT 240
GCACTACTGA TGAGGCTCAA AGAAGGCTCC CGTGGTCATT TCCCCACAGC TCCGAGCCCA 300
GGTCACCTCG TTCTCCCACC TTCTCCACCT AATCTCATCT ACTAGCTTCC CCTCTCCACG 360
ACCTCAATTT GGTAACCGTC GAGGCAATGA AGGCATAGAG GGCCAAGTGA CTGAAACAAT 420
ATGCCGACAA CCCCAAAGCA CCACTACGCT CTCCAAAGAG GGCAGCATCC CACCCTCAGG 480
CGCTGGAGGC TTGACCACTC TCCAGCTGAC CGGCCAGGGC CGACGGTCCC TTTCCCGCCA 540
GGCTGCGGGC AGGCGGCTGG AACGGGGAAG GCGGGGACCT GAGGGAGGGG CGCCCGCCTC 600
GCCCACCCCA GCGACCTGGG GCAACGCCCC GCCGCCGGCG 640