| Tag | Content |
|---|
EnhancerAtlas ID | HS129-10384 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr13:44848300-44849400 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr13:44848662-44848683 | AGAGGGAAACAGAAAGTGAAA | - | 7.2 | | IRF1 | MA0050.2 | chr13:44848668-44848689 | AAACAGAAAGTGAAAGCAGAG | - | 9.01 |
|
| | Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
| SE_04172 | chr13:44846956-44849617 | Brain_Anterior_Caudate | | SE_07866 | chr13:44844014-44849956 | Brain_Inferior_Temporal_Lobe | | SE_26413 | chr13:44844000-44849940 | Duodenum_Smooth_Muscle | | SE_30933 | chr13:44841483-44853733 | Fetal_Thymus | | SE_32140 | chr13:44846920-44848703 | Gastric | | SE_32140 | chr13:44848880-44849667 | Gastric | | SE_35075 | chr13:44839894-44849832 | HeLa | | SE_39583 | chr13:44847318-44850248 | Jurkat | | SE_43309 | chr13:44846826-44848797 | Lung | | SE_43309 | chr13:44848854-44849622 | Lung | | SE_54848 | chr13:44843095-44851173 | Stomach_Smooth_Muscle | | SE_55190 | chr13:44846849-44850879 | Thymus |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH13I044270 | chr13 | 44844591 | 44851115 |
|
Enhancer Sequence | TGCTCCCACT CCTGACTTCA GTATTCCAGG CTCACACAGC CAAATCAGCT CTCAGAAGAA 60
GTCAACCCCA GAGTAGATTC TGGGTCACAG CTGTTACAAT CAGGAAGTTG GTCTTTAACC 120
CCAGGTAGAA GCTTCACTTC ACTAGGGTGG GATCTTTGAA CACAGAGCAT CCCTTCCATC 180
TGCTGTCCCA CACCTGCCTC CCTATGCCTA TTCTCATCAA CACATATTTA AAACCTTTGA 240
AGGACAACCT CAAGCCACAT GCAAAAAACT TCCTAATTAT TAGGGAGCGA ATTTGCAATA 300
TTTTAGTATA TATAAGTAAG AGTGAATGAA AGAGACATAG AGGCCGAGGG AGAGGCAGAG 360
AGAGAGGGAA ACAGAAAGTG AAAGCAGAGG CAGAGTTATG CATAACAGGT TCTAAAATAC 420
ACTATTTGGT AGGGGTGTAA TGATGACGCA CATTGCTAGA GAAAAGAACA AAATGGAGGA 480
AGCTCTCTGG CGTCTATGTG CCTTATAAAA TTATTAATTT AACCAATCCC TAAAGTCATG 540
AAGTATTAAG TGACAAGTTG TCTAGCTACA ATAGTATGAG TCAACTACTG CATATTCCAC 600
TCTATTTTAA CATTGAAGCC TAAGATGATT TAGGCTAACA AAGTCATTTT CCAAACAAAT 660
CTAAAAATCA AATCTTCATA CAAGAAAAGA GGGAGAAGCA CCAGACTTTA ACCCCAAATG 720
GCAGCCAGTC TTTATGAGAT TCTGTTACAG GGTCTGTAAA ACTCTGAGCC AGCTGCATGG 780
AAAGGACCCA GGACCACTCA CACTGACTGA TGTGGTCTTT GAAAATGTGC CAGCAAGGCT 840
TACAGAGAAG GAAACCAGAG CTTTTCAGAA CTCAGCTCCT CTGCACAGCG ACACAGTGAG 900
ATGGACAAGG GCTGCTCTAC TGAATTTGCA AATGTGAATT TAACCCACTT ATGAAAACAG 960
TACCGGGCAT GGCTATATCA CTTATCAGCT CATCAAGTTT GTTCTGGAGG GGAAGCAGTT 1020
TTGTGTGGCC CCACTATCAG GCACCAGCCT CATAAAGAAG CAAGCAGCAC AAATCCTAAA 1080
TTCTGTGGTG TTTAATGGAG 1100
|
