EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-08944

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr12:56976390-56976790

Target genes

Number: 35
Name	Ensembl ID

DGKA	ENSG00000065357
WIBG	ENSG00000170473
CDK2	ENSG00000123374
RP11	ENSG00000258554
AC034102.1	ENSG00000255990
SUOX	ENSG00000139531
RPS26	ENSG00000197728
ERBB3	ENSG00000065361
PA2G4	ENSG00000170515
RPL41	ENSG00000229117
ESYT1	ENSG00000139641
MYL6B	ENSG00000196465
MYL6	ENSG00000092841
SMARCC2	ENSG00000139613
RNF41	ENSG00000181852
OBFC2B	ENSG00000139579
ANKRD52	ENSG00000139645
COQ10A	ENSG00000135469
CS	ENSG00000062485
CNPY2	ENSG00000257727
STAT2	ENSG00000170581
TIMELESS	ENSG00000111602
SPRYD4	ENSG00000176422
GLS2	ENSG00000135423
RBMS2	ENSG00000076067
BAZ2A	ENSG00000076108
ATP5B	ENSG00000110955
AC117378.1	ENSG00000241217
PTGES3	ENSG00000110958
NACA	ENSG00000196531
HSD17B6	ENSG00000025423
PRIM1	ENSG00000198056
ZBTB39	ENSG00000166860
STAT6	ENSG00000166888
SHMT2	ENSG00000182199

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr12:56976449-56976461	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr12:56976453-56976465	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr12:56976457-56976469	GTTTGTTTGTTT	+	6.32
Zfx	MA0146.2	chr12:56976697-56976711	CCCGCCTCGGCCTC	+	6.01

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH12I056580

chr12

56974635

56977090

Enhancer Sequence

ACCCTCCAAA TCTACTGAAT TACAAACTCT GAGGATGGGG CCCAGTGATC TGGGCTTTTG 60
TTTGTTTGTT TGTTTGTTTT AAGAGGGCGT CTCCCTCTGT TGCCCAGGCT GGAATGCAGT 120
GGTGCAATCT CGGCTCACTG CAATCTCCGC CTCCTAGGTT CAGGCGATTC TCCTGTTTTA 180
GCCTCTGGAG TACCTGGGAT TACAGGCATG CGCCACCACG CCCAGCTAAT TTTTGTTTTT 240
TTTAGTAGAG ACGGGGTTTC ACCATGTTGG CCAGACTGGT CTCAAACTCC TGACCTCAGG 300
TGATCCGCCC GCCTCGGCCT CCCAAAGTGC TGCGCCACGC CCAGCCGTGA TCTGGGTTTT 360
AACAAGCCCT CCAGGTGATT CTGTTGCAGC TAATGTTGAG 400