EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-03562

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:224319620-224321770

Target genes

Number: 17
Name	Ensembl ID

SUSD4	ENSG00000143502
WI2	ENSG00000235428
SNRPEP10	ENSG00000227002
CAPN8	ENSG00000203697
CAPN2	ENSG00000162909
TP53BP2	ENSG00000143514
PHBP11	ENSG00000227621
ACTBP11	ENSG00000188460
CICP5	ENSG00000233771
RP11	ENSG00000232372
FBXO28	ENSG00000143756
DEGS1	ENSG00000143753
NVL	ENSG00000143748
CNIH4	ENSG00000143771
CNIH3	ENSG00000143786
WDR26	ENSG00000162923
AKR1B1P1	ENSG00000229991

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:224321214-224321235	CTTTACTTTTATTTTTATTTT	+	7
Nr2f6(var.2)	MA0728.1	chr1:224319738-224319753	GAGGTCAGGAGTTCA	+	6.22
Nr2f6(var.2)	MA0728.1	chr1:224320291-224320306	GAGGTCAGGAGTTCA	+	6.22

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I224132	chr1	224320701	224320850
GH01I224133	chr1	224320855	224321539

Enhancer Sequence

TGAGGAACTC TTACAACTCA ACAATAAAAC CTATTTTAAA AGTGGGTAGA GGGGCCAGGT 60
GCAGTGGCTC ACACCTGTAA TCCCAGCATG TTGGGGGACT GAGGTGGGTG GATCACCTGA 120
GGTCAGGAGT TCAAGACCAG CCTGGGCAGC ATAGTAAAAC CCTGTCTCTA CTAAAAATAC 180
AAAAACTACC TGGGCATGGT GGCGGGTGCC TGTAATCCCA ACTACTCAGG AGGCTTAGGC 240
AGGAGAATAA CTTGAACCCG TTGGCGGAAG TTTCAGTGAG CCAAGATCGC GCCACAGCAC 300
TCCAATCTGG GTGACAGAGC AAGACTCTGT CTCCAAAAAA AAGGACAAAG GATTTGAATA 360
GACACTTCTC CAAAGAAGAT AAGTAATAGC CAACAAGCAC ATGAAAGGTG CTCAACATCA 420
TTAGTCGTCA GGGGAATGCA AATCAAAACC ACTACGAGAT TTATATCCAC TAGCGCTTTA 480
TATCCACTAG GATGGCTACA ATGGAAAAAT GTTGGGGAGG ATGTGGACAA ATTGGAACCT 540
TCATATATCA ATGTTGGGAA TGTAAAATGG TGCAGTCACT TTAGAAAACA GTTTGGCTGT 600
TCTCAGGCCG GATGTGATGG CTCACGCCTG TAATGCCAGC AGTTTGGGAG GCCAAGGCAG 660
GTGGATCACC TGAGGTCAGG AGTTCAAGAC CAGCCTAGGC AACATGGTGA AACCCAGTCT 720
CTACTAAAAT AGGAAAATTA GCCAGGCATG ATGTCGGGTG CCTATAATCC CAGCTTCTTA 780
GGAGGCTGAG GCAGGAGAAT TGCTTGAACC TGGGAGACGG AGGTTGCAGT GAGCCAAGAT 840
CGTGCCATTG TGCTGCAGCC TGGGCGACAG AGTGAGCCCG TCTCAAAAAA AAAAAAAAGA 900
AAAAACAATT TGGCTGTTCT CAAAAAGTTA AACAGAGAGT TATTGTCTGA GCCACCAATT 960
TCATTCCTAG ATAAGTACCC AAAAGAAATG AAAACATAAT GTTTGCACAA AAACTTGTAC 1020
ACAAACGTTT TTAGCAGCAT TATTCATAAT AGCCAAAAAG TGGAGACAAT CCAAATGTCC 1080
ATCAGCTGAT GAGCAAACAA AGTATGATAT ATCTGCATGA TGGAATATTA TTGGGCAATA 1140
AAAAGGTACA TGCTACAACA AGAATGAACC TGGAAAACTA TGCTAAATGA AAGAAGCCAG 1200
AAACATAAGG CTACTGTATG ATTCCATTTA TCTGGAATGT TCAGAATAGG TGGATCCAGA 1260
GAAACAGAAA GTAGATTAGT ATTGCCAGGG GCTGGGAGAA TGGGAGTGGC TGATAATGGT 1320
TACAGGAGTT AATTTTGTGG TAATGAAAAT ATTCTGAAAT TAGATAGTGG TGATAGTTGT 1380
ACAATCCTGT GAGTATACTA AACACCACTA AATTTAGTCC TCTTTAAGAT AATTTTATTA 1440
TGTCTGAGTT ATTTCTTAAA TTGCTAAAAA GTTTAAAGGA GTTAAATTTT ATCATCAAAA 1500
GCATATCATC TCCTGCCTAT ATTTCCATGT GTAATCCATT CATTTATCTA ATTTCTTTGG 1560
TTCTAATAGC CACTAGATTT GATAGCCAAA AAACCTTTAC TTTTATTTTT ATTTTTGAGA 1620
TGGAGTCTTG CTCTATCACC CAGGCTGGAG TGCAAGTGGT GCAGTCTTGG TTCACTGCAA 1680
CCTCCGACGC CCGGGTTCAA GCGAGTCTCC TGCCTCAGCC TCCCTAGTAG CTGGGACTAT 1740
AGGCATGCAC CATCACGCCT GGCTAATTTT TTAGTAGAGA CGGGGTTTCA CCATGTTGCC 1800
CAGCCTGGTC TCAAACTCCT GACCTCAGGT GATCCACCCG CCTCAGCCTC CTAAAGTGCT 1860
GGGATTACAG GCGTGAGCCT CCAAGCCCGG CCCCAAAAAA CCTAATTAAA ATATATATAT 1920
ATATATATAA TTTGTTTTGT TTGTTTTCAA ATATTTTGTC AATGAGTACC AGTCTTTGGT 1980
AACGATTTCT AGGCATAGTG ATTCATTCAT CATTACAGTT AAATTATGAC CCAACTGTAG 2040
ATTTCTAAAT TAACATGTAA AAGACTGTTT CATTAAGCCA TCTTGATTGC TTAATATTTT 2100
AGTCCACAAT ACTGCTTTAA TGGTTGCCTT GCTTTTATTA TTATTATTAT 2150