EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-03514

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:223406010-223407850

Target genes

Number: 4
Name	Ensembl ID

CAPN2	ENSG00000162909
TP53BP2	ENSG00000143514
PHBP11	ENSG00000227621
ACTBP11	ENSG00000188460

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

TBX20	MA0689.1	chr1:223407315-223407326	GAGGTGTGAAG	+	6.02
TBX20	MA0689.1	chr1:223406579-223406590	CTTCACACCTT	-	6.32
TBX21	MA0690.1	chr1:223406580-223406590	TTCACACCTT	-	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I223232

chr1

223405948

223407902

Enhancer Sequence

AGAATTTCTG TACCATACAG ATCAACCATT TAATCAATCA TTTAATGAGC AAAGGCAGGC 60
AGCACGGAGT GGCATATAGG GCCGTGGGCT GTGGAGTTAC CCAAATTTGT GTTCAAACCT 120
CAGCTCTACC ACTGATGAGC TTCAGGGTGT TAGGCAGCTT GTTTGACTTC TCAGGGTCTT 180
AGCTTTCCCA TCTGTCTAAT GAGTGAAACA ATTCCCAACT CCTCCAGTTG TTGAGAGGAT 240
TTGAAGATGT ATGAAAACTG CATAACACAA AGGTCAGGGA CACAGTAGGC ACTTAATAAA 300
TAATAGCTAT TAGTATCACT GGTGTCCAAA CTTGCTGGGG TTCCCATGCT GCCCTTCCCG 360
TACTGGGGCA CTACCAGGCT CCTTATGCAA TTAGGATACC TGGGATTGCA CCAGGGAAGC 420
CCCAAACATT CAGAGAATGT GAACACATCT CATCACCACA TTTTCTCAGA GGCCAGATAA 480
AAACCATCCA TTGTAGAGGC CTTAACTCTG AGACTGTCAT AATCGGCTGG TAATGGAGAT 540
GCATTTTCCC CTTAAGTAGA AACAATTATC TTCACACCTT GTAGTGTTTG TAATGATTGC 600
ACCTGGCAGA CCATTAGCTT TGCTGTAAAG GAAACCCCAT GTGGTGTGGT GAGGGTAGGG 660
GGTGGGAGCG TTTCTTTTAA CTTGGAAGGA AACAACAACA AAAGTATTAT TAATTATAAA 720
CTTAGGGAGG CTTATTTAAA AATCCCAATA TAAAAATACC CATGGCTTAG GGGACTTCCA 780
CCTCTCACCC AACACTGCCT CTCACTATGA GGCTCGACTG AGTACTGCTA CTGTCTCCTC 840
TCTACACCTT CCCTAACAGA CAGACAGTTC CACACAGACA GACAGACAGA CGGATGGACA 900
CACTCCCACA CCCAGAGGCC TCAGACACAT GGCAAACAGC CCCATGAACA ACGGCCACAT 960
GGTTGGCGTT TGAAATAACC TGTGTGTTCC TAGAAATTCC GGTGAGTAAA AGTGGACCGG 1020
GCTATGGCAC TTTTTTCTGT TCTTATCTTA GAACTCCTTT AGGCTCAGCC TGTGACTCAT 1080
ATCCCGTCAG TTGCTAGTTC TAAGGGAAAC ACACCCAGGG AAAACCTGTG GGTGGCATGA 1140
ACAAAGATCC TTCTGCAACT CCATTTTTCT TAATGTTTCT TACTTTAGAC ATTATTAGCA 1200
ACAGGGCTTT TGTGAGGCTT GGGAGTCTGG ACATTCAGTG GTTATAGGCA GAATCCAAGA 1260
AAGGCTCTGC TGACACTCAG CCAGAAACGG ATGATTCCTG TCCCCGAGGT GTGAAGTCTC 1320
TGTTCCTTGT TTCATGACAG AGGGTTACGG CTCTTTTCAG ACTAGCTGGA AAATTCCTAC 1380
CTACCCAAAA GGCAGCAGAG TCCAGTTTTT ACCATACTTA GTCTCTTGTG GAACTTCCCA 1440
GAGGTGGGCT ACATGTGGGG AGGCGGGACC AAAGGATAGG GTGCTGAGGC ATGGGACCTG 1500
AAGTCTTCCC TGTGTTGGCC AAGAATGGCC TGAGCTGGGC TGGATGGGGC TGCTATAAGA 1560
CTGCAATTTC CCCAAATAAG CCTTCCCTCA TTTTCCAGCC TCCTTTCAAT TTAGTGTCTT 1620
TTCCTCACCC TCCCTCTGGC TATTTCCTCC TATGCAGATT TAATTCCAAC ACAAACACCA 1680
GCCTCTTTGG GAAGCCTTCC CTGAGTGCAC AGGCAGTGAT CTTGGAGTTC CTGGGCACTT 1740
TGTGCATTTT ACATGCCTAA TACTTGTACA GATTCATAAA CTCTTTGAGA GCAGGGGCCG 1800
TGTCTCTAGA GTTTTTCTAA CTCCTGTAGC ATCCAGCATG 1840