EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-03426

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:218636150-218637540

Target genes

Number: 3
Name	Ensembl ID

RRP15	ENSG00000067533
RP11	ENSG00000223375
TGFB2	ENSG00000092969

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_02323	chr1:218635599-218637662	Astrocytes
SE_37059	chr1:218635214-218638958	HSMMtube
SE_38564	chr1:218635938-218637602	HUVEC
SE_45788	chr1:218635176-218639378	Osteoblasts
SE_51738	chr1:218635656-218637466	Skeletal_Muscle_Myoblast
SE_56115	chr1:218635322-218638954	u87
SE_63527	chr1:218635502-218637466	HSMM
SE_68133	chr1:218622758-218673720	TC32

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I218461

chr1

218635328

218638710

Enhancer Sequence

CCCATTAATC CGAAGGGAGT GGTGAGTAAA TTCCTTATAT ATCAGTCTAA GAATAGGTCT 60
TGGAGCTATT CAAGTGTGTG CCATCATGTG AGCAGTTTCT TCTTTTTTTA AAGGAAGCAA 120
ATGGTAATGG TTGGGGAAGA AAAGGAATAA ACGGTAAAAA AAAATGGATA AAAGGGTTTG 180
GATAAAATAA AATTTACCCT AAACATGTCT CTGTGGCTTG AAAGAATCAC TGCATAGAAA 240
AGGTTTTATC TGGGGAGGGG TTGTGGGGGG AGAAGTTGTC TGAGAATATT TTCCCCGCTG 300
TGGCATTTCC CATTGGAGCC TAACCCAAAA CTCTGAAAAT CCAAGGAAAG TGAGCACTTT 360
TATTTTATTT CTTTCTTTTT TAAGGCTGCT TTGCACTGTG ATTTTTTTGA CTCAAGGGAT 420
TCTGATTCTT TCCTCTGCAT GCAAGGATAA CAGGCCCTAG CCATGTCCAG CTTGCCCCCT 480
CAACACAGGT CAGAATCCCT TTCGGATTTC TGTTTCCAAC AGAATGTCTG GCAACCAGAC 540
TTTCTGAATC AGCGTTGTTT CTGCACCGCT GCTCCCGACA CGCTGGAGGC CAGGCAAAGA 600
GCAAAATACA AAGAATTGAA ACTAATTCCG CAAGGCTGCT AAAGGTTTCA GATACAGCCC 660
AGTTTCCTCT CTGAATCCGT TGTTCTCCTC TGTGCCCCTT TATGCTTCTG GGCACCACAC 720
TCTAGGCGAA AGAGTCTCCT GGGACCAACA CCTAACCAGG TTTCCTCACA GTACCTGTTT 780
GTATGGTGAG TTAAAAACAA GCAAAATTTA AAAACGGTGT ACATCTGGAC AAGTTGGAAA 840
GGTCAAATGG ATTTTTTTTT TTTAAGGATG TATTTCTGCA TGACTCACTG GGCCTTCTCA 900
CTTCCTGCTA GAATTATTAC AAAATATATC TGGAAGACAG TGAGCCCGCT GATGACTTCC 960
CTTCACGGAC TACACACAGG CCTGCTGTGG TATCAGGCGC CCCTTGGCCA GCTGCCCTCT 1020
TTCTTGGTCC CCTCTCCAGG GTCACTAGCA AAGACACAGA CTGGCCACAG ATAACAATTA 1080
CTTCTCCCAA GCTGGCTTGT TCCATTAAGC ATTTTGGGAA AACCAAATGG CTATTGATGA 1140
TGATTGAGAT TTTGCTCATG TGCAGCCCTA AAGGGCGGGA AAAACACCAC TCTGGAAAGG 1200
TATTGGATGA TAGCTGTGAA TGACATTTCT TATGACGACT GCTATTTTGA AATGTGCTTT 1260
GTAATAATAT TTCAGGCACT CAGTTTAAAT TTCAAGTTCT CAAGCAAAAT TATATACAGT 1320
AAGGAGGAAA CTTTCTGCTC CCCTTGCAAA TTTTTGTTGG TGGTATTCTC ATAATTCTAT 1380
TTTTTTTCTT 1390