| Tag | Content |
|---|
EnhancerAtlas ID | HS129-03009 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:204057590-204059610 |
Target genes | | Number: 17 | Name | Ensembl ID |
|
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| SPDEF | MA0686.1 | chr1:204058253-204058264 | TACATCCGGGT | - | 6.62 |
|
| | Number of super-enhancer constituents: 20 | ID | Coordinate | Tissue/cell |
| SE_01182 | chr1:204056274-204058246 | Adrenal_Gland | | SE_01182 | chr1:204058247-204059454 | Adrenal_Gland | | SE_03017 | chr1:204056278-204058243 | Bladder | | SE_03017 | chr1:204058249-204059534 | Bladder | | SE_04661 | chr1:204056379-204058327 | Brain_Anterior_Caudate | | SE_04661 | chr1:204058370-204059675 | Brain_Anterior_Caudate | | SE_06365 | chr1:204056169-204060053 | Brain_Hippocampus_Middle | | SE_24644 | chr1:204057659-204057977 | Colon_Crypt_2 | | SE_24644 | chr1:204058329-204058842 | Colon_Crypt_2 | | SE_31799 | chr1:204056312-204059529 | Gastric | | SE_41791 | chr1:204056249-204059508 | LNCaP | | SE_42361 | chr1:204054906-204059621 | Lung | | SE_47675 | chr1:204057647-204058068 | Pancreas | | SE_47675 | chr1:204058262-204059202 | Pancreas | | SE_49400 | chr1:204056234-204059271 | Right_Atrium | | SE_50648 | chr1:204056148-204059540 | Sigmoid_Colon | | SE_53078 | chr1:204056234-204059443 | Small_Intestine | | SE_54451 | chr1:204056226-204059533 | Spleen | | SE_65332 | chr1:204054712-204059717 | Pancreatic_islets | | SE_68685 | chr1:204056205-204059260 | H9 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I204087 | chr1 | 204056343 | 204060013 |
|
Enhancer Sequence | GCATATAACC AGTACACTAA ACATAATTTT ATAATCTATC CCCAGGCACA TTCAGATTTG 60
CCTTTTACTC TTGTTCTTTC CAGAGATGGC TGGTTCTGCC TTTTTGCACC TGTCTGTGCC 120
TTCTCACTCC TGTCCCGTTA CCCCCACTCC CAGACTGGGG GTAGGTGACT GGGAACAGAG 180
TCAGTGTGGG GTAGGGGTCA TTCCTGCTGT TGAACTGATC TGATAAGATG AGATCAGACC 240
TGACCTCTCT GGGCTTAGCA CAGACGGCTG GATGCACAGG CCCAGCCTCC CCTCTGCATC 300
CCACCCCAGC GGCCACCACC TCGCCTCGTC AGGGATCAGG ACACCATGCC TGGCACTCAG 360
CAGGTACCCA TTAAATGTGA AGTGAAAGCT CAATTAGAGT TCGGACAAAT ACATACTGTG 420
CAGGCTCCTC GGGACCTGGC TTTTGAGCTC ATGAAGGGAG ATGCTGGTGG GTTGAGGGGA 480
GCCTCCAGTG GTCCAGAGGG TGGGAGGAAT CAATTTCCCT CTCAGCGATT GTGACCAGGG 540
AGGCATTTCT TTCTCTGCTT GGCCTTGCAG GAAACAGTGT TGAGAATGAG AGGAGCAGAA 600
AGGAAGAGCT AGGCCTTGTA TTAATTTGTT TTTCAGATTG AGTCTCTGTT ACTAGCAATT 660
TATTACATCC GGGTCTCCAG CCAAGCACAT TCTGTTCTCC AGTGTTGGGG GAAGATGCAT 720
GGGGGGGTGG GGAAGAGGCT GGACAGGAAA GAGGAGCAGA TCAACAATTT TATGACTGAG 780
TGTGTGGTGT CTTGGCGTGC GCTAGAGGAC GGTTTTAGCA CAGGGCATTT TGAGCCCAGC 840
CCCGTGTGGG GAGGCACTCC TCTGGACAGC ATGGCATTCC CATGCGAGCC CAGACAGCCC 900
TGGGGAGCAG GATGAATGGG CTTCCCTCCC ACTCTCATGC CCGCCGGCCT CAGGGTCCAG 960
ATTTCTCTCT GTGAAATGAG GTCAGGACAG TGATGCCTGG AACAAAATCA TAGTTTCTTG 1020
AGGCAGCGGG GCCTGGGGAG ATCCCTCCGA GGAACAGGGG AGCAGCTGTG TGAGGGGACC 1080
CCGGAAGAGG GGTAGCAGGC AAGGCGGCCA CCCTGTGGAA AGAATGGTGC ACAAGCAAAA 1140
CAACCCCCTC TCTGCAAAAG TGCTGAGCTG GTGGAATTTC ACTTGGCGGC TGTGAGATCA 1200
GGGCAGTAGA TAGAGCCCTG CGGGCACCAG GGCTGTGTGG GTGCAGGGGG TCCCGGAAGA 1260
GAGGGCAGGG GCAGCACCTG TGGCACCCTC TCCCCTGAGC TGGCCTCCAC ATTGCCCAGG 1320
GCTCATCACT GGTCCCCATT CCTGGAGGTG CGTCCCTTAT CTCTATCCAC CTGTCACGTA 1380
AGTTGGTCTC ATTCTTCCCA TTTTCCCTCA TTCTCTTCCC AACTGTGGCT TTGACTAGAA 1440
GTAGCTACAT CATCTAGTCT TCAAGGGGCC AGCATTGCGT AGAGGGCCAT GGTGCCAGAG 1500
GGCAGGGAAC TCTGGTAGGA GGAACTCTCT CCGACCAGGA TGGTGGTGGC TGAAGCCCCC 1560
GGGGCCTCTG CCTTATGGCT GGGCCTCTGG TGGGAGCCCA GGCTGCTTAG GGGAGAGTGA 1620
ACCCTTCGGT AGTGGTTTTT TGCATCCCAG CCACATCTTC AAGCTGGGTG CCATTGGATG 1680
GTTGTTGAAG GGCAGATTCA CTGGAAGGAT AAGAAGCTCT GGTGGGACTC TGGGTAGAGC 1740
CAGCACAGAG AATGTGTGTG TTGGGCAGTC GGGGAGAGAG GGTGTTAGGC AGGGAGAGCA 1800
TGGGCCTGGT TTCCAGCTGT GAGGTTTGAA CTATTATTAT CCTCCACACT GAGCTGATGG 1860
CCACTTAACC CTGAGGCTGG TTACTTGTTC TCTGTTCTCT GGGTTGACTG CCTCCTCCCT 1920
GACTAGCTCA AGACTTCTTC TTCTTCTTTT TTTTTTTTTT TTTTGAGATG TAGTCTCACT 1980
CTGTCACCCA GGCTGGAGTA TAGTGGCATG ATCTTGGCTC 2020
|
