EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-02991

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:203670740-203671170

Target genes

Number: 10
Name	Ensembl ID

BTG2	ENSG00000159388
RP11	ENSG00000229652
ATP2B4	ENSG00000058668
SNORA77	ENSG00000221643
LAX1	ENSG00000122188
ZC3H11A	ENSG00000058673
ZBED6	ENSG00000257315
SNRPE	ENSG00000182004
KRT8P29	ENSG00000236430
SOX13	ENSG00000143842

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_00067	chr1:203668074-203672953	Adipose_Nuclei
SE_13787	chr1:203669458-203670861	CD34_Primary_RO01536
SE_18521	chr1:203669771-203671643	CD4p_CD25-_Il17-_PMAstim_Th
SE_20327	chr1:203670799-203671738	CD56
SE_25804	chr1:203668680-203672745	Duodenum_Smooth_Muscle
SE_54514	chr1:203667818-203673407	Stomach_Smooth_Muscle

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I203701	chr1	203671097	203671644
GH01I203699	chr1	203668668	203670861

Enhancer Sequence

ACTAAATAAT TCATTTCTGC AGCTGCCTGC AGATGAATAA GGGGGAAGCT TGCCTGGTGC 60
TGTTGAAGTA ACACGGAGAC ACCTTTCAAA GTCTTTGCCA TCAGGCAGAA ACGGTTCAAA 120
CCTCTCACTT CCTAATCCCC ACCCCATTTT TCCAAGCAAT GTGACTCAGG CCAGGAGCAA 180
GAGAAAGCAC CTCAGGTATG AGTATGCACT CACCTACATG AGCGTTTTGG TGGATATCCC 240
GAGGATTCAT GACAGCCTCT AGCAAGAATG AATGAAAACA GAGATGTGAG CTTCCTTTAC 300
ATTTATGTCC CTTCCCTGCA ACCCAAACAC TTTGCTGTTG TCCTTCTGGG CTCTGAGCAG 360
GACCAACAAA TTGGATCTCT TAATAGTTAC TTTGGGTTTC GACCCCACTT TTTTCTTTCT 420
TGTTCAAACA 430