EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-02927

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:202057280-202057810

Target genes

Number: 15
Name	Ensembl ID

LAD1	ENSG00000159166
RP11	ENSG00000224818
PHLDA3	ENSG00000174307
CSRP1	ENSG00000159176
RPS10P7	ENSG00000223396
NAV1	ENSG00000134369
IPO9	ENSG00000198700
SHISA4	ENSG00000198892
LMOD1	ENSG00000163431
TIMM17A	ENSG00000134375
RNPEP	ENSG00000176393
ELF3	ENSG00000163435
ARL8A	ENSG00000143862
UBE2T	ENSG00000077152
PPP1R12B	ENSG00000077157

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_23058	chr1:202053464-202058044	Colon_Crypt_1
SE_23723	chr1:202057256-202057990	Colon_Crypt_2
SE_24689	chr1:202053506-202058012	Colon_Crypt_3
SE_33417	chr1:202052951-202058349	H2171
SE_50066	chr1:202053487-202058006	Sigmoid_Colon
SE_56929	chr1:202057253-202057709	VACO_400
SE_67045	chr1:202052951-202058349	H2171

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I202083

chr1

202052295

202058144

Enhancer Sequence

TCATTTCTAT TGCCCCTTTT CAGAAAAAGA TGGGAACAAG TGAAAGGGGA CCTAAGAGGG 60
CTAGTTAGGG ACACAGGGAG AGCACAGCAG AGGGAAAGAG GCAGCTAGGA AGACAGGACA 120
GAGGGGTAGA AGGGGTGGGG GAGATAGACT GAGACATCTG CCTTCTCCTC TGGGCCAGCT 180
CTCTCCAGCT CGTCACCATG GTGATGGCTG CCCAAGGACT TTGTCCAGCT TCTGCTGCCC 240
ATGGGAAGTT ATCTGGCCAG GATTTTGCTT TGCTGCAGGC TGAGAGATGA GGGCAGAGGT 300
AAGCAGGGAG TTTAATGGGT CAGAGATACT GAGGGAGGAA TCAGTGGGAC AGGGCCATAT 360
GGGTGCCCTG GGCTCTGAGC AATCGGATTC GAGGGATGCT CTCCTCAGCA GAGTACTTTC 420
TGTCTGGTGA CAGGGGACTT TCTATTTTCC CTAAATGGAG AGAAATAGAA TGCCTGGACC 480
CTATGAGAAG GTAAGAGCCA CATTCCTTGA GAAGGCCAAT TGTGGGGAAG 530