Tag | Content |
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EnhancerAtlas ID | HS129-02212 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:154441930-154444100 |
Target genes | Number: 11 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RARA | MA0729.1 | chr1:154443779-154443797 | GAGGCCATAAGTTCAAGA | + | 6.16 | SPIC | MA0687.1 | chr1:154443852-154443866 | GAAAAGAGGAAGAA | + | 6.47 |
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| Number of super-enhancer constituents: 3 | ID | Coordinate | Tissue/cell |
SE_14719 | chr1:154436834-154442328 | CD4_Memory_Primary_7pool | SE_18405 | chr1:154441784-154442651 | CD4p_CD25-_Il17-_PMAstim_Th | SE_24531 | chr1:154442565-154442850 | Colon_Crypt_2 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I154469 | chr1 | 154441785 | 154442850 |
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Enhancer Sequence | TGAAATGTAA TTATTGCTTT GGGCATCTGG GTCATCTAAA AAAAAAAGGC TTGCCTGATT 60 CATGAGGAGA AAGGAGTGAG GAAGGGGGGA TAATTAAGTA GAACCATTTT TGGGGGGGTA 120 TCCCCTTAAT GCAGGATTAA AGGACCGCTC AAAAGTAGGT AAGTTCAAGG AAGAAGCAGC 180 AATTTCTCAG AAGGCTTTAA TTATGACAGT ATTTCCCACA CGAGTCCTGG GATTTCTGGA 240 AGGGGTGTGT GGGATTTTGC CACGCTTACA TCACATTACC AGGTGGTGGA CAGGTGGGGA 300 AGGAAAAGGA AGGGCCATTA TTTGTCAGAA GACTGTTTAT TGGACCTGGG AGGGGGTGTA 360 ACACTATCAC AAAGGCCACC CTGAACTCTT GATCATCAGA TAGACCAAAT CCATCCCCTA 420 CTGAAAAGGA TCTTAGGTAG GAAAAACTTG GGACACAGCC ATCCACATCT TCCAAACAGA 480 GGAAAAGCCA TCATGCGGAC TCTTTGTGGG TGAGAGCTAC TGTGTAAACA GTTCAGGGAT 540 GGGGAGGCGA GAACTGCAGG GAAGCCTGGA AATTATGTAA CTCCACTCAA AGCTGGACTG 600 AGAGGCGCCG CCTCTGGGCC CCCACCTGGG CAGTCAGAGG AAAGCCACAG GACAGGTGAT 660 GGTGGCCGCC ATCTCCTTCA GGACACCATG CTCTCCTCTT TGAGGCTGGT CCTTGTCTTG 720 CAGAAAGTGA CACAGGGACC AGATGTCACC CAGGTGGCCA GGCTGCGTGG GCCATGGAGG 780 GGGCACGGGA GTGGGCACTG GAGCCAGGAC GTGGAGGGAG CTGCCTCCCT TTCTTCATGG 840 CATTGCTGTT AGGATGACAT GGTTACGGTG CTCTTTCCAG AAGAACTTAG GAGAGCAGAT 900 GGTGATTTCT GTAGAGGATG GCAAGGAATA TGCAGTTACT GGAGCAGCCT TCTAAGAAAG 960 CATTTTCCTT ATTTACTGAG GCACAGGGCA ACCAAACCTT TCTGAATATC TGTGAGAATT 1020 ACAGGGCAGG GGCAGGAAAC AGTGTTTGCC ATCCTCCATC CTCCAGTAGC AGAGGTGTGC 1080 TGGCGAGGTG AAAGGCCTTT TAAGGCCAGG TGCGGTGGCT CACTCCTATA ATCCTAGCAC 1140 TTTGGGAGGC TGAGGTGGGT GGATCACTTG AGGTCAGGAG TTCGAGACCA GCCTGGCCAA 1200 CATGGCAAAA CCCCGTCTCT ACTAAAAATA CAAAAATTAG CTGCATGTGG TGGCGGGCAC 1260 CTGTAATCCC AGCTATTCTG GAGGCTGAGG CAGGAGAATC GCTTGAACCT GGGAGACAGA 1320 GGTTGCAGTG AGATGAGATC GTGCCATTGC ACTCCAGCCT GGGCAACAGA GCCAGACTCT 1380 GTCTCAAAAA TAAAAAATAA AAAAAATTTG CCTGGCATGG TGGCGGTCAC CTGTGATTCC 1440 AGCTACTAGG GAGGCTGAGG CAGGAGGACT GCTTGAACCC GGGAGGCGGA GGTTTCAGTG 1500 AGCTGAGATC ACACCACTGC ACTCCAGCCT GGGTGACAAA GAGTGAGTGA GACTCCATCT 1560 CAAAAAAAAA AAAACACAAA AAAAAAATAA AAGAAAGGTT CAAATGCAGC ACTGCTGTAA 1620 GGGCTGGGGC GAGAGCTCAG AGCAACTCCT TAGGCGGAGT GGTGAGCCCG CGGGCCACAG 1680 GGTGAGGGGC CTGTTGCACC ATCTTTCAAA CACTACCCAA TCTCTAATGT CTTTATGGAA 1740 GTTCCCATCT TCTGCAGGTG TATGTCACTT AAAAAACAAA ACAGGCCAGG CGCAGTGGCT 1800 CATTCCTGTA ATCCCAGCAC TTTGAGATGC TGAGGTGGGA GGATTGCTCG AGGCCATAAG 1860 TTCAAGACCA GCCTGGTGCA CATAGCATGA CCCTATCTCT AAATAAGAAA AAATAAAAAT 1920 GAGAAAAGAG GAAGAAGTAC ATTTCCCTAT ATCTACAAAA AAGAAAAAAA ATTAACCAGG 1980 TGTGGTGGCA CCTGCCTGTA GTCCCAGCTA CTCAAGAGGG TGAGGCGGGA GGATTGCTTG 2040 AGCCCAGAGT TCAAGGTTAT AGTGAGCCAT AATTGTGCTA CTGCGCTCCA CCCTGGGTGA 2100 CAGCAAGACC TTGTCTCAAA AAAGAAAGAA ACAAGCAAAC AAAACACCAC TAGTTCAGCC 2160 ATGTCCTACT 2170
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