EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS129-02169 
Organism
Homo sapiens 
Tissue/cell
MCF10A 
Coordinate
chr1:153534070-153536200 
Target genes
Number: 44             
NameEnsembl ID
SPRR1AENSG00000169474
SPRR1BENSG00000169469
SPRR2CENSG00000229035
SPRR2BENSG00000196805
SPRR2GENSG00000159516
RP1ENSG00000230779
PGLYRP3ENSG00000159527
PGLYRP4ENSG00000163218
S100A9ENSG00000163220
S100A12ENSG00000163221
AL591704.5ENSG00000237008
S100A8ENSG00000143546
S100A7AENSG00000184330
AL591704.9ENSG00000203781
S100A7ENSG00000143556
BX470102.3ENSG00000238279
S100A6ENSG00000197956
S100A5ENSG00000196420
S100A3ENSG00000188015
S100A4ENSG00000196154
S100A2ENSG00000196754
S100A16ENSG00000188643
S100A14ENSG00000189334
S100A1ENSG00000160678
CHTOPENSG00000160679
S100A13ENSG00000189171
SNAPINENSG00000143553
ILF2ENSG00000143621
NPR1ENSG00000169418
AL713889.1ENSG00000242565
RP11ENSG00000235015
INTS3ENSG00000143624
SLC27A3ENSG00000143554
GATAD2BENSG00000143614
DENND4BENSG00000198837
CRTC2ENSG00000160741
CREB3L4ENSG00000143578
SLC39A1ENSG00000143570
JTBENSG00000143543
RAB13ENSG00000143545
RPS27ENSG00000177954
TPM3ENSG00000143549
UBAP2LENSG00000143569
C1orf43ENSG00000143612
TF binding sites/motifs
Number: 3             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
Foxq1MA0040.1chr1:153534602-153534613AATTGTTTATT+6.02
RREB1MA0073.1chr1:153534118-153534138CCACCAAACACCCAGACCCT+6.13
SREBF2MA0596.1chr1:153534366-153534376ATCACCCCAT-6.02
Number of super-enhancer constituents: 6             
IDCoordinateTissue/cell
SE_27045chr1:153535708-153541871Esophagus
SE_34451chr1:153535867-153542547HCT-116
SE_34737chr1:153535871-153542493HeLa
SE_36040chr1:153533581-153542335HMEC
SE_64375chr1:153535710-153541858NHEK
SE_68094chr1:153505033-153542157TC32
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr1153534600153534841
Enhancer Sequence
AAAGTGACAG GAAATACACT CATCACCAAG CCAGCCCCAA CCCCAGCTCC ACCAAACACC 60
CAGACCCTCA CACATTCAGG TTGGTTCCCA GCTCTCCCTC CCCACTGGGC AGCTGGGTAT 120
AAGGTGGGCA GGAGGCCCTG GGAGCTACCA AGAGGGCCCA GTGAGTAAGG AGAGAGACAG 180
ATACTCATTG GTGAGCATCT CCAGTGTGCC CTCCTCCTGG ACACAGGGAG GACACTGGAT 240
GCTCCTCTGA GCATGCATCA GCTCGAATCC CACAGGAGCC CAGCGAGGTA GGTATCATCA 300
CCCCATTCTG CTGATGAGGA AACCGAAGGT TGCTGCTCCC CAACACCAGC CAGGTAGATT 360
CAGAAAAGAA CACTTTTTAT TTTTTAAGAC AAGGTCTTGC TCTGTTGCCC AGGCTGGAGT 420
GCAGTGGCAC AATCACAACT CACTGCAGCC TCAACCTCCT GGGCTCCAGC AATCCTCCCA 480
CCTCAGCCTC CCAAGTAGCT GGGACCACAG GCTCATGCCA CCACACCCAG CTAATTGTTT 540
ATTTTTAGTA GAGACAAGGC CTCGCTATGT TGCCTAGGCT GGTCTTGGCA ACCAGAGTGA 600
TCTCACTTTG TCACCCAGGC TGTATTATAG CTCACTGTAA CCTTGAACTC CTGGGCTCAA 660
GCAATCCACC CAAGTAGCTG GGACTACAAG CGTATGCCAC CATGCCTGGC CAATTTTTAT 720
TTTTATTTTT GTAGAGATGG AGTCTTGCTA TGTTGCCCAG GCTGGTCGAA CTCCTGGGCT 780
TAAGAGATCC TCCTGCCTTA GCCTCCCACA CTGTGGGGAT TACAGGCATA GGCCACTGCA 840
CCCAGCTGAA AAACACTTTT TTAATACTAG CCGAAATAAT TAGAAAAATT TAACCAGCCA 900
CAAAAACAAA ATTAAAAAAA GGAAAGAAGG ACCTGCCTCA TGTGTTCAAA GCCTGACACC 960
TAACTTTGGG AATCACCAAT GAGTCAGTAT AGGGAGGGTG AGGGACAAAT TGAAGGTCGA 1020
TGCATTTCTC CACAAAATGT CCCAGACTAT ATATCTTAGC TGGGCTTTTC TATCCCTACA 1080
TACTTTCTTA GTTTGGCATA TAAAAATGGA AAGAGGTCAA GCACAGTGCC TCACATCTGT 1140
AATTCCAATA CTTTGGGAGG CCGAGGTGGG AGGATTGCTT GAACCCAGGA GTTCAAGCCC 1200
AGCCTGGACA ACATAGCAAG ACTCCATCTC TACAAAAATA AAAATTGGCC AGGCATGGTG 1260
ACAATACTCC TGTAGTTCCA ACTACTTGGG AGGATTGCTT GAGCCCAGGA GTTCGAGATT 1320
ACAGTGAGCT ATGATCCAGC CTGGGTGACA GAGTGAGATC TTGTCCCCCC ACCACAAAAA 1380
AAAAAAAAAA AAAAGGAGTC CGGGCACGGT GGCTCACGCC TGTAAGCCCA GCACTTTCAG 1440
AGGCCGAGGA GGGCAGATCA CCTGAGGTCA GGAGTTCGAG ACCAGCCTGA CCAATATGAT 1500
GAAACCCCGT CTCTACTAAA AATACAAAAA TCACTTTGGG AAGCCGAGGC AGGTAGATCA 1560
CGAGGTCAGG AGTTCGAGAC CAGCCTGGCC AATATGGTGA AACCCTGTCT CTACTAAAAA 1620
TACAAAAATT AGCTGGGCGT AGTGGGATGC GCCTGTAGTC CCAGCTACTC AGGAGGCTGA 1680
GACAGGAGAA TTGCTTGACC CCTGGAGGCA GAGGTTGCAG TGAGCCGAGA TCGTGCCATT 1740
GCACTCCAGC CTGGGCAACA AGAGGGAAAC TCCATCTCAA AAAAAAAAAA AAGAAAAGAA 1800
AAGAGAGAGA GAGAACGTGC CAGTGCTGTG TGATCTTGGG ACAATCACTT TTCCCTTCTG 1860
GGCTCTGGTT TCTCAAGTCT CCAATGACAG GATTAAACAG ATGGACTCGG AAGGCCCTCA 1920
CAGCACATGG TTCTCTGGAA TGCTGCAGGA AACAGCCATT AATTAAGCAC TCCCACTCGG 1980
GCCTCATTTC CACTCCAGTG GAGCCATGAA GCTAAAGTGG GGAGGGGGCT GGGCCCCACC 2040
CTGGCACCTG CATCGACAGG CACCCGGAAC TGGGGGAGAG ATTTAACCTG CACCCCCACA 2100
CTCACACCAG GACCTCCCCC ACAGGCCTGT 2130