EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-02157

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:153347170-153348020

Target genes

Number: 32
Name	Ensembl ID

PGLYRP3	ENSG00000159527
S100A9	ENSG00000163220
S100A12	ENSG00000163221
AL591704.5	ENSG00000237008
S100A8	ENSG00000143546
S100A7A	ENSG00000184330
BX470102.3	ENSG00000238279
S100A6	ENSG00000197956
S100A5	ENSG00000196420
S100A3	ENSG00000188015
S100A4	ENSG00000196154
S100A2	ENSG00000196754
S100A16	ENSG00000188643
S100A14	ENSG00000189334
S100A1	ENSG00000160678
CHTOP	ENSG00000160679
S100A13	ENSG00000189171
SNAPIN	ENSG00000143553
ILF2	ENSG00000143621
NPR1	ENSG00000169418
AL713889.1	ENSG00000242565
RP11	ENSG00000235015
INTS3	ENSG00000143624
SLC27A3	ENSG00000143554
GATAD2B	ENSG00000143614
DENND4B	ENSG00000198837
CRTC2	ENSG00000160741
CREB3L4	ENSG00000143578
SLC39A1	ENSG00000143570
JTB	ENSG00000143543
RAB13	ENSG00000143545
RPS27	ENSG00000177954

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:153347518-153347530	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:153347522-153347534	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:153347526-153347538	GTTTGTTTGTTT	+	6.32
RREB1	MA0073.1	chr1:153347493-153347513	TTGTTGTTGTTGTTTTGGGT	-	6.72
Zfx	MA0146.2	chr1:153347767-153347781	CCCGCCTCGGCCTC	+	6.01

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_09814

chr1:153327871-153350996

CD14

Enhancer Sequence

GCCTAAAGAA AACATAACAT CCTCCATATC TATTTTGTGG TCTCTGCTCT GTTTGATCCA 60
TGGTGAACTT CTCATGTGTG GATAGGATGG GGAGGAGAAA ACATATAATA CTGTCTAACG 120
TCTAAAAAAA TCAGCCTCAG TTGCCCATGT TCCATACCAC CTCATCCACC GGGGTGCATA 180
ACTTGGAGGG TATTGCTTAC TCAAGGTCCC TTGGGAAGGG TTCTGTGATT GGCCAGGCTG 240
TTTGCTTTCC TCAGGTGATG GCACTATGGC CACATATCCC CCACAAATGG TCCATAACCC 300
ACCCCTGCTT AGCCATTCTT TTTTTGTTGT TGTTGTTTTG GGTTTTTTGT TTGTTTGTTT 360
GTTTGTTTTT GAGACGGAGT CTCACTCTGC CGCCCAGGCT GGAGTGCAGT AGGGCGATCT 420
CGGCTCACTG CAAGTTCTGC CTCCCGGGTT CACGCCATTC TCCTGCCCCA GCCTCCCGAG 480
TAGCTGGGAC TACAGGCACC CGCCACCACG CCCGGCTAAT TTTTTGTATT TTTTTAGTAG 540
AGACGGGGTT TCACCATGTT AGCCAGGATG GTCTCGATCT CCTCACCTCA TGATCCGCCC 600
GCCTCGGCCT CCCAAAGTGC TGGGATTACA GGCGTGAGCC ACCGTACCCG GCCTGCTTAG 660
CCATTCTTAA ATCATGGGAC TGAGTCTACA TAGCACAACA AGAGCTGATC TACTTGGGTC 720
CAAAATGCAA TATCACCCCA GAGGTGCTCA GGCAAGTGGA GGGTTGTGGT TTCCAACACC 780
TTGTGATTTC AAAGTGGTCA CCTGCAGTCA CTACCCTGTG GACCACCTAA GAACCCATCC 840
AAGGAAAATG 850