Tag | Content |
---|
EnhancerAtlas ID | HS129-01926 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:145242570-145244820 |
Target genes | Number: 25 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nkx3-2 | MA0122.3 | chr1:145244710-145244723 | TTTAAGTGTTTTA | - | 6.33 |
|
| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_00003 | chr1:145206326-145251024 | Adipose_Nuclei | SE_01701 | chr1:145242575-145244377 | Aorta | SE_08814 | chr1:145242868-145243607 | Brain_Mid_Frontal_Lobe | SE_09140 | chr1:145238017-145251093 | CD14 | SE_13318 | chr1:145242673-145244410 | CD34_Primary_RO01536 | SE_36948 | chr1:145240496-145244575 | HSMMtube | SE_41324 | chr1:145241102-145244412 | Left_Ventricle | SE_42337 | chr1:145242547-145244381 | Lung | SE_43396 | chr1:145239308-145249227 | MCF-7 | SE_45621 | chr1:145237874-145250910 | Osteoblasts | SE_46950 | chr1:145243085-145243692 | Ovary |
|
| Number: 3 | ID | Chromosome | Start | End |
GH01I149425 | chr1 | 145243079 | 145243280 | GH01I148644 | chr1 | 145243911 | 145244110 | GH01I146193 | chr1 | 145242547 | 145244409 |
|
Enhancer Sequence | TAATTTATAA AGAAAAAAGG TTTATTTGGC TAATAGCTTT GCAGATTGTA CAAGAAGTTT 60 AGAGCCAACA TCTGCTTCTG GTGAGGGCCC AAAAAACTTT CGTGGCTGAA GGTGAAGAGG 120 GAGCAGGTAT GTAACATGGC AAGAGAGGAG GGAGCAAGAG AGATGTCAGT CTCTTTCAAA 180 CAACCAGCTC ACATGGTAGC GAGAACTCAC TCATTACTGT GGGTGGGCAC CAAGCTATTC 240 ATGAGAGATC TGCCCCCATA ACCTGAACAC CTCCCAGTAG GCCCCACCTT CAACATTGGG 300 GATTATGTTT CAACGTGAGA TTTGGAAGGG ACAAAATAGC CAAACTGTAT CAAGCACAAA 360 GAAGATACAG AGATAGTCAA TGGTGGAGCT AGTATTCAAA CCCAGATTTG TCTGATTTCT 420 GCATCCATGC TTTCAACTGC TTAACTGCAT TGCTTCCAAT ACTCAGAAAA GACGAAATGT 480 TTTCCATATC CCAGGAACTT AAAAGTGAAA AAGCAGAGAG CTAGAAGACC CTGTAGTGCT 540 GAATTGAGAG TCATGAGTGT TACAAGGATG GGTGGGGGGG TGGCCCTGTG AGGACCAGAA 600 CCCTCCAGGG GAAGCTTTCT GGGTGAGGCA AGAGGTGAAC TGGGCCTTGA AGGAATGGGT 660 AGAATTTAGA TAGTAATGAG GAAGGCAGAA ATCAGTGGAA GCACAGACAT GCATGGAGGA 720 ATGGAACTGA GTTCAATGAC GATCTGTTCA GGAAAGAGGG CATAAACTGG GCAGAGAATG 780 CAGTGGAAGT GGTGGGGAGT AATACTGGGC ACGTAAGGTA AGCTCTGATC TGGAAGGCCA 840 GCATGGGAGC CTAGACTGGT TAAAGTAAGA AATGGCTTGT CCTTGGAAGA AAAAGTGTCA 900 AACTTGGTAC TGTGTGAAGG TACTGCACAG ACCTCCCAAC TGGTTCTTAG GAGAGCCAAA 960 CTGAGGCTAA GTTCTGAGAA CTAAGTAAGA ACTGACAGCC ATTGTAGGTT AGAAAGTAGT 1020 GGGGCAACAT GTTACAAGTA GTGCTTCTGG AAGGTTAGAT GCGGTTAGAA TAAAATCATT 1080 GCCATTTTGG GGAGCTGGGA AAATGGATGT CTTCAGTCTA GTCTAAAAAG GGATGACTTG 1140 AATAAGCTTA TATAAGAAAG AAAAGAAAAA CCTTTTTACT CACTGGACCA TTTCATAATC 1200 TTGACTTTTT TCAAACATAA ATCTGTGTCA TTTTTCTTAT TTAAAACAGC TGAGCAGTTT 1260 ACTCTCCTAC TTAGAGCTGT GATCCTTATC ATGGGCTCTT GTGATCTAAC CCCAGCCTGC 1320 CTCCCTGGCC TCTGTCCTTG CTTAATAACC TCTAGCCATA TGAACCTGGA ATACCAGTCT 1380 AATTCCCACT TCAAGGCTTT TACACTTGTT GTTTCCTCTG CCTGGGGTGC TATTCCCTCA 1440 TATCTTCATG ACACTTGTTC ATTTACATTG TAGCTCAAAG CATACCTCCT CAGGGAGGCC 1500 TTTCCTAGAC ACTATCTGAG GTACACTCCT GCACCCCCAG CCTTCATGAT TGCTTTTTAT 1560 ACATTACTGG GTTTTGTTTC CAATGGAACT TATCGCTTAT TACTGTCCTA AATTATTTTA 1620 TTTATTAATT TTTTAGCCAC CTTTCTCTTA TAGAAATAAG GTTCCTGAGG ACAGGGAGTT 1680 TATTCTGTAT ACTACGGTAT CCCTGACATC AGGGCTTGTG CCTGCCGATA GTAGATGCTT 1740 TCTAAATATG TTCTGAATAT TAGATAGCTA GTTCCCAAAT GCACTGCACT GAAAGTGTAT 1800 GAAAATTGGA AATTGGCTTC TAGATTTTTG TATTATATTG CCAAATGATG GAGTGATGAG 1860 ATTGAAATCT ACTACTTCTT TTTGCCTTTT TTTTTTTTTT TTTTTTGGTG GAGTAGAGGA 1920 GGGCCTGCAC AAACAGCAGA TACACACACA GTAAATAAGA TTTATTTCAG CCAGCAAGTA 1980 TTTATTGACA TGAAAATTGG GGTTAAATGT GACTCTTTGT GAGTGACTAG TTTCTTGGAG 2040 TCTATTAAAG CATCAGTTTA AACATCAATT CTCTATGGTA TGATTAATGT TTCTTTTTTT 2100 ACTTTATAAG CATGAAGCTG CCTTCAATTT TATTGTTAAA TTTAAGTGTT TTACATTGGA 2160 AAAAAGTAAA TTGAATTTTG AAATGAGGTC TGTCCCGGTC TCACTTTCAT GGCTTCAGGT 2220 TATCAAAGTT TTAATTTCTC TTTGTATGGA 2250
|