EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-01923

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:145227510-145229320

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_00003	chr1:145206326-145251024	Adipose_Nuclei
SE_09140	chr1:145206360-145237816	CD14
SE_13245	chr1:145225421-145229331	CD34_Primary_RO01480
SE_13318	chr1:145218421-145234799	CD34_Primary_RO01536
SE_26590	chr1:145225965-145228364	Esophagus
SE_35833	chr1:145207387-145230055	HMEC
SE_36948	chr1:145207783-145229996	HSMMtube
SE_42337	chr1:145226736-145228223	Lung
SE_45123	chr1:145223248-145228413	NHLF
SE_51737	chr1:145222542-145229079	Skeletal_Muscle_Myoblast
SE_53593	chr1:145225862-145228593	Spleen
SE_55702	chr1:145220453-145230056	u87
SE_63523	chr1:145222320-145229462	HSMM
SE_64276	chr1:145223134-145229788	NHEK

GeneHancer

Number: 4
ID	Chromosome	Start	End

GH01I146209	chr1	145223833	145228191
GH01I148660	chr1	145224109	145228308
GH01I149406	chr1	145224223	145228216
GH01I120739	chr1	145224237	145228211

Enhancer Sequence

TTAAGTATCT CTGATTTAAC TCTGTGTGTG TGTGCGTGTG TGTGTGTGTG TGTGTGTTGG 60
GAGGAGGAAT AGACCTTGGA ATTGTTTTTT CAAAACTTTT TTTATAATAG TGCCTAATCT 120
CAGTTGGCAA GGAATAGCTG TCCAGAATGC TGCATAGATC TAGTGAAAAG ATTTAGGGAA 180
GTTGTAACTA GTTTAATAAC CATCTGTGGA GTGACATAGA TTGACACACC CAATTACACA 240
AGACCTGAGT CTGAGAACTG TTGATGTGCA ATCATCCCAT CAGCATCTGC TCGTCATTAT 300
CAACAACAAT AATGGCTCAA CTATTTCTTT GAGGCCACAT GAAAAGACAG TGTACCCATA 360
GCAAAGGATA AGTCAGACCT GAAAAAAACA TAGCCCTCTG CATCCCCTTG TTCCCAAACT 420
TCTTTTTAAA CATAACCTTT TGTGAAGTTC TGAAAGAATT CATTTTATGT TTTCTTTTTA 480
TTAATTTTTC TTCTTAAATA CCATGTCTTT CTGGCTGAAA TCCTTGCCAA AACCAGGAAG 540
GGCCAGTGTA CTGTGGGTGA TTTTTCTAAT TCATTTCTTT GTCATTTGAA GCCTTCTGTG 600
GCTTCATGCT GCTTTATGTG TGTGTAAATA TTCAGTATCT TTTCTAGTTT ACACTTTTGT 660
CACAACTGCT ATTAAGCCAC CTATGGACAC ATTCTAATAT AAATTATTTT GGCCACTGTG 720
AGTGGGAGGG AAAGAATCAG TTCACAGGGA TAAATTTGCA TGTTGAGAAG ATAATATATA 780
ATAGTTTGCA AAACACTTCT ATGTACATTG TATCTTTTAT AGAGACAAGG CCATGTTTTT 840
ATTTGTGGAG ACTGAGACAG AGACCCCATG AGATCTAATG CAGAGTCACA TGACTCCAAA 900
GCCAGGTCTT CTATCTGCTC TTTGGTATAT AACTGGATCA TTATTCTATT GACAGAAATA 960
AGGAATCTTC TTATTTTTCA AAGGCACCCT TTTGCCCTTG GAAGGTATAT TTAGAAATCC 1020
TTTACCAGAC TAGAAAGAAG ACAGTTATAT TTTCCTGCCT TTTGATAAAA AACAGTGTGT 1080
TTTTTCTAAA TCTTGTTGTG TTTGACTAGA GTCTGATTAA GGTACCTTTT GGGAAATTAA 1140
GGTTCTATAG AAATTACTGG GCTCAATCTA GTGATACAAA TATGTGTTGT TTGATTTATC 1200
AACACATTAC AAACCTTAAC TTTGGAGTTT TAATATCTGG TTATCTTTAA TATCTGGTTA 1260
TCTTCTTTCT GAAGTGTATG TACACAAAAT TGATGCTAAA TAAGGTCTTG TTGTTTTGGC 1320
AAATAGTGAA ATGCAAGGTA TTGGTAGATC AGTACTGTTA TAACTTTGGT GCAAAGTTGC 1380
TGCATGCAGA TTGGCTGTGG GACCTTGTTC ATTTTTTGAG AACTAATGTA GAGTTTGAAA 1440
AAACACCGTA AGCCTGCATT CCAGAAGTTC TGGTATGGAT AGTGTGAGCC CAGGGAATGT 1500
GCTTAGATAA AAGATCATTT AACAAATAGG TTTTGCATTT TTTTAGCAAT CAGGCTTTGT 1560
GCTGAATATT AGAGTGGTTG TTTCAGAGAG TTTGCAGCAA TTAGGCTTTA TTGGTGCACT 1620
AAGGAGAAGC AGAGAGGAGA AGCAATTCTT GGTAACTTCC TTGGAAGTTG CAGCTAACTC 1680
TGAAAAGTCT GGGTTGAACT AGGTAAGTAA CTAATTCCTA GAATCAATAA ACTTTGCAGG 1740
AGTCCGTTTG ATTGTACATG TAGCTCCCTG GAATTGCTAT TGGTCCCTAA ATCATCAGTT 1800
TGTAATGCTG 1810