EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-01634

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:109967670-109968920

Target genes

Number: 20
Name	Ensembl ID

CLCC1	ENSG00000121940
RP11	ENSG00000244716
WDR47	ENSG00000085433
TAF13	ENSG00000197780
TMEM167B	ENSG00000215717
SCARNA2	ENSG00000238881
RP5	ENSG00000251484
SARS	ENSG00000031698
CELSR2	ENSG00000143126
SORT1	ENSG00000134243
PSMA5	ENSG00000143106
SYPL2	ENSG00000143028
CYB561D1	ENSG00000174151
AMIGO1	ENSG00000181754
GPR61	ENSG00000156097
GNAI3	ENSG00000065135
GNAT2	ENSG00000134183
AMPD2	ENSG00000116337
GSTM4	ENSG00000168765
AHCYL1	ENSG00000168710

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL2	MA0478.1	chr1:109968717-109968728	GGGTGACTCAG	+	6.02
IRF1	MA0050.2	chr1:109968238-109968259	AAACAGAAACTGAAAGTAAAA	-	9.95
JUNB	MA0490.1	chr1:109968717-109968728	GGGTGACTCAG	+	6.02
Nkx2-5(var.2)	MA0503.1	chr1:109967782-109967793	AAGCACTCAAG	+	6.02
REST	MA0138.2	chr1:109967750-109967771	ACCAGCACCTAGAACAGTGCC	+	6.46

Enhancer Sequence

GCCTGGGCCA CAGAGCGAGA CTGTCTCAAA AGAGTCTCCT ATATGCGAGC AAGGAGCTTG 60
ATTTTGTCCA TTGCTGTAGC ACCAGCACCT AGAACAGTGC CTTGTTCACA GCAAGCACTC 120
AAGCACATTA ACTAAGAGAA TAAAAAGGGA TGTATTTTAG GCCGTCTTGG GAAGACAGAA 180
AAATAAGTAA CAAAGCAGTC AATACATATG TTAAGTAAAT GGCCACAAAA TTTAATAAAT 240
GCCTTCTGAT AAGCATAACA ATTTCTATCA TACACACCCT AACTCAAAAT TATGTCACCC 300
GAAGATGATT CTCTTCAATG TTCTGGAAGT TAAATATCGA CCAACAAAGT CACTTTATAG 360
GACAGTGGGG AAATATGTCA AAACTTCACA CACATCTTCT ACGAGTCAGT AAAAAAGATG 420
AAAAAGTGGT AACTGCAGGT GGTAAAACTT CGACAGGATC AGCATATACT TGACAGGAAA 480
TGCAGCATCT CATACCACTC AGTACAAAGA AAATGTCTGC CTTCCCTGAC TTTAAAAAAG 540
AGTAGCTATG TAAAAACTTA ACTGACGAAA ACAGAAACTG AAAGTAAAAA TGTCTACAGC 600
ATATATATGT ACAACTTAAT ATTGTGAACA TTTTCATACC ACAAAAGTTT TTTAAAACTT 660
GCTTTAAACT TTTAAAAAGT CAGAAAAAAT TTTGGTCAAT TGGAATCGGC ATGATGAGAA 720
ATCTCTTGAA AACCATTCTA AATTCCAGTT CCTATAAAAT CAGACTCCAG ACAATATATC 780
CAGCCAAAGC TACGACTGCC TTCGCGCTTC TGAAGAAACT ATACACCGCA GCATGCCCTA 840
CTACAAACCA GTTGCTTTTT CTTCCAGGAA GCACGTTTAA CTTTTTGTTT GTTTGTTCAA 900
GGCAGTCATA CTAGGCACGA AAAGATGAAC GGAGCAAAGA GTGACCCTTG GCCTTCTCCG 960
GGTTCAAGGT AGGAGTTCCG GCTCCTCACG CCTTCTTTAC CAAGCACCAG CCGGAGCTTC 1020
TCGCTTCCGC ACCGAGTTAG GACCCAGGGG TGACTCAGCG GTAGGACAAG TGCCGCCGAT 1080
GTGGTCTAGC TTGGGGAAGG ACGGCGGGCG CCTGAGGAGG GCATAACATC CCCAGGTCCG 1140
GCCAGTCTCG GGTTCCTGGG GAGCCCCATG ACACGGCAGA ACCCAGGCCG CGCGGCCAGG 1200
TCCCGGGCCT GCCCACCCAT AATTCCCACC CGACGTCCCC CAGCTGCACG 1250