EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-01251

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:62695510-62697350

Target genes

Number: 3
Name	Ensembl ID

HBXIPP1	ENSG00000236646
AL136458.1	ENSG00000242860
USP1	ENSG00000162607

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA2	MA0036.3	chr1:62695632-62695643	TTCTTATCTCT	+	6.32
Gata1	MA0035.3	chr1:62695632-62695643	TTCTTATCTCT	+	6.32
ZNF263	MA0528.1	chr1:62697234-62697255	AGAGGAAGAGGAAGAGAAGAA	+	6.77

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I062228

chr1

62693947

62697507

Enhancer Sequence

TCCCACTAGC TGCCTAACCC AGAGAGGAGA TTGGGAAAAG AGAAACAAGT TACAGAATTC 60
AAGAGTAGGT ATCATCTGGG GTCTTCCTGA AGGAACAAGT GTTGCTCCAG AGAAGCCAGA 120
AATTCTTATC TCTGCTTTGC TCTAACCACC TCTTTAGGCT TTATGACTGA AGAGTCCCTT 180
TGGCCCCTTA ACTCCACAAG GCTGACCCTG GTGATCAGCA GCTGAGATCT ACATGATACA 240
GTCCAGACAC CAGAAGGAGA CTGAATCTCT CTCCCAAATC TCAGCTCTAA AATTCCCAAG 300
AGAGGGCCTC ATGGGTCCAG GCAGTGTCTG GTGTCCGTCC TGCAATGGCC AGGAGCCAGG 360
TTTTCTTGTA GGAGTGTGAC AGCTCCTCCT GCAGTCGGGG ATCCTGGATG GGGCTGAGGA 420
GAAGTTCCAA GGCAAGGAGG ATTGGCATCT GCTCCATAAG TGCATTCTTC TCTTTGCACT 480
TGATCTTTTA TCTACCTCAT AGATAGATCC TTCTTGCTCA CACTTTCAGC CTGTCCTTTT 540
TTTTTTTTTT TTTTTTTTTT GAGACAGGGT CTCGCTCTGT CACTCAAGCT GGAGTGCAGT 600
GGCATGAACT TGGCTCACTG CAGCCTCCAC CTCCCAAGTT CAAGTGATTC TCCTGCCTCA 660
GCCTCCCAGG TAGCTGGGAT TACAGGCGTG TGCCACCACA CCTGGTTAAT TTTTTTGTAT 720
TTTTAGTAGA GATAGGGTTT CACCATGTTG ACCAGGCTGG TCTTCAACTC CTGACCTCCC 780
CAGTGATCCA CCCACCTAGG TCTCCCAAAG TGCTGGGATT ACAGGCATGA GCCACTGTGC 840
CCAGCGCTTT CAGCCAGTTT GACCTCTACT CATGCAAATT TTACCTTTCC CTTTATGCCT 900
CACTCCACCT CACGGCTTCA CTCTCTTCTC CCTGATCGCA CCCCACTGTG ACTGCCTGAA 960
ATGCCACATG TTTCTTCATT CAGATTTCTC AGATAATTCA ATGGTTCCAC CCATAATTCC 1020
ACACCTGGCC ACTTCATAGA CAATGACTCA CTTAAGGACA GGCTGCCTCA GGGTGCACAG 1080
CCTGTATTCA GGAATCTGCT AGAGCAACAC ATAGCTGTAC CTTCTGCAAG GCTGTGGGCT 1140
GGATGACTCC ACTGTGGGCG TGGAACACGG GCTGGTGTCA TAAGGAGACA TTCTTTATGC 1200
CTTAGGCATT GAAAGGATAC TCCTTCCAAA AGGCCTTTCC CAGCGTTTCC CCCTGAAATC 1260
CACTAACCAT AGCATTTCAC TGTTGACACT GCCATATAGT GCTAAGTGCA GTTGTCTAAC 1320
TCCTACTGCC ACAGAGATTC AAGTGTACAA TGGCTTACAC GTGTGAGAAG ATTATTTCTT 1380
GTTCAGATAT CAAATGCAGA ATAAGCAGTC CAGAGAGGAG ATGACAGCTT TATGGTGTTG 1440
GGGACCTATG CTCCTTCTGA CTTGCTGTTC TATCATCCCT TGGACGGTGG CCTCATCTCC 1500
TTGGATCCAG ATGGATCACT ACCACATTCC AGCCAGTGGG AAGGGGGAAA TGCATTTCCT 1560
TTTCCTTTAA ATGCGGGAGC CAGAGTTTGC ACACCTCACT TCACTCACAC CTTGCCAGCC 1620
AGAACGTAGT TACAGGGTCA CATCAAGCTT GAAGGAGAGC TGGCAAATGA AGTCTATTTT 1680
GGGTGGCCAT GTGCCCAGCT AAAAGTTGGG AATTCTATTA TTAAAGAGGA AGAGGAAGAG 1740
AAGAATGCAT ATCCCACCAT TCTGTCACCG TTTTTGACTG CTCTCCACTC ACTATCCAGT 1800
CTGTCACATG CTGGCACATC CCATTCCTGA TGCCTTTCCT 1840