| Tag | Content |
|---|
EnhancerAtlas ID | HS129-01000 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:43813710-43814510 |
Target genes | | Number: 21 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CDX2 | MA0465.1 | chr1:43813971-43813982 | TTTTATTGCTT | - | 6.32 | | mix-a | MA0621.1 | chr1:43813904-43813915 | ACTAATTAATT | - | 6.62 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_03360 | chr1:43813758-43814605 | Brain_Angular_Gyrus | | SE_23264 | chr1:43813602-43815872 | Colon_Crypt_1 | | SE_23848 | chr1:43813941-43815771 | Colon_Crypt_2 | | SE_24762 | chr1:43813843-43816295 | Colon_Crypt_3 | | SE_31866 | chr1:43813587-43816440 | Gastric | | SE_34471 | chr1:43813503-43816544 | HCT-116 | | SE_35010 | chr1:43813554-43816263 | HeLa | | SE_57439 | chr1:43813955-43815756 | VACO_503 | | SE_65856 | chr1:43813657-43816001 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I043347 | chr1 | 43813613 | 43816407 |
|
Enhancer Sequence | CCCTTATCCC TTCCCCTTAC TCATCAACTA AGTTGATGGC AATAACGTAC TAATAGTCCT 60
CAAATTCCTA CCAGGATTGC CTTAGACTCA TCTGTGACCA TCCAGCCGTG TCATCCATGC 120
TTTTAGCACA CTAAACTACT CTGTGGCACA AAACCAAGCA TTAAATGCTT CTCTGGACTT 180
CCGTGGTGCC TTGCACTAAT TAATTGTTGT GATTATTTAC CTGTTTGGAT GTCTTTCTCA 240
TTAGATATGT AAGAGACGGT GTTTTATTGC TTTCTCCCCA GTGCCTAACC CAATGTTTGG 300
AGTATCACAC AGTTCATAAA TGTTTGCTGC CTTCCTGCTT GTACACATGA TGCTTGTACC 360
CCAGCGCCTA ACGCAAATCT GGCATCCTCT GCAGCATGAG TATTATTTGT GGCATGGTCT 420
GTGTGGCTCT GAATATATCT GTTTCTGGGG GTGTCCATCG CCCGACCTGG AGTTGTGAGA 480
ACACCCGGTA GGGTGTGCGT GTACCGGGAT CCCTGCCGAG GGTGTACCTG GGTGTTGGTG 540
TTAGGATACG TAGCTCTCTG AGGTGAGGTC TGTGTCTCAG GAGGTGGGCC TGGCACGTTT 600
CTCTCGGGCA GAGCGTGATC CCGTTAGGGA GAGGCTCTCG GTTAGGGCGC TCTATCCTGT 660
TGCTGGGAAG CGTGTTTTCT GCCGGTGGGG CTCTTTGTGG GAATCTCCGA CCGCCTGGGG 720
ATTCGGAGCT GCAGGATTTG GGTCAAACAG ACGCTGGGCT ATCGAAGCCC CGACGCCGGG 780
CCACCGCACG CTTCTTTGCT 800
|
