Tag | Content |
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EnhancerAtlas ID | HS129-00913 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:39859930-39860660 |
Target genes | Number: 14 | Name | Ensembl ID |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RARA(var.2) | MA0730.1 | chr1:39860602-39860619 | TGACCCTTCCTTGGCCT | - | 6.18 |
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| Number of super-enhancer constituents: 16 | ID | Coordinate | Tissue/cell |
SE_00753 | chr1:39855343-39861646 | Adipose_Nuclei | SE_02098 | chr1:39860180-39862099 | Aorta | SE_02863 | chr1:39860041-39862159 | Astrocytes | SE_26157 | chr1:39855144-39866292 | Duodenum_Smooth_Muscle | SE_30690 | chr1:39860149-39865801 | Fetal_Muscle | SE_37092 | chr1:39855581-39868937 | HSMMtube | SE_38617 | chr1:39856603-39862237 | HUVEC | SE_46332 | chr1:39856649-39860128 | Osteoblasts | SE_46332 | chr1:39860146-39866167 | Osteoblasts | SE_47389 | chr1:39856575-39867060 | Panc1 | SE_49419 | chr1:39858896-39860136 | Right_Atrium | SE_49419 | chr1:39860157-39861822 | Right_Atrium | SE_55086 | chr1:39859150-39865239 | Stomach_Smooth_Muscle | SE_55918 | chr1:39856681-39866226 | u87 | SE_64104 | chr1:39860136-39863063 | HSMM | SE_67929 | chr1:39856681-39866226 | u87 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I039391 | chr1 | 39856812 | 39867008 |
|
Enhancer Sequence | ATTGATTGAT TGATTGATTT ATTGCCACAT AGAAAGCAAG CTTAGGCATC TTCATGTGCA 60 CATGAGAAAA GCCCTGGAAG AGGCTGGGGG CGGTGGCTCA CGCCTGTAAT CCCAGTACTT 120 TGGAAGGCTG AGGTGGGTGG ATCACCTGAG GTCAGGAGTT CGAGACGAGC CTGGCCAAGA 180 TGGTGAAACC CTGTATCTAC TAAAAATACA AAAATTAGCT GGGCATGGTG GCACATGCCT 240 GTAGTCTCAG CTGTTTGGGG AGGCTGAGGC AGGAGAATGG CTTGGACCTG GGAGGCAGAA 300 GTTGCAGTGA GCCGAGATCG CACCACTGCA CTCCAGCCTG GGTGTCAGAA AGAGACTCCG 360 TCTCCAAAAA AAGAAAAAGA AAAGCCCTGG AAGACAGGGC CCAGCATGGA GTTGAAAGAC 420 TGCCAGTTTA CTCCTTCCTT TCAAATGATT ACAAGGACAG TATCAGCTCA TGTACGTTTT 480 TGGCAGTTAG TACACCTGCC TGAGAGTGAG TCACTGGAGG ATAGAGCAAA TGAGGTTAGC 540 GTTATCTACC TGCCCTTGGA GAGACAGGAA ATCACACTTG GTATGACCTG TCTGTCACCT 600 GGAGGTTTAG GTTTCCCCAG CTTTACCAAG ATGAGTGGGT ATCCTCTATC CCTGCCAACC 660 CCCACCTTGT GCTGACCCTT CCTTGGCCTG TCTTGGTTTT TTCCTTTCTT CCTTAAACAA 720 AGCTACTCCA 730
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