EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00808

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:33234610-33235270

Target genes

Number: 21
Name	Ensembl ID

KPNA6	ENSG00000025800
MARCKSL1	ENSG00000175130
RP4	ENSG00000225828
BSDC1	ENSG00000160058
ZBTB8A	ENSG00000160062
Y	ENSG00000200591
ZBTB8OS	ENSG00000176261
RBBP4	ENSG00000162521
SYNC	ENSG00000162520
RP11	ENSG00000224409
KIAA1522	ENSG00000162522
S100PBP	ENSG00000116497
YARS	ENSG00000134684
FNDC5	ENSG00000160097
HPCA	ENSG00000121905
TMEM54	ENSG00000121900
RNF19B	ENSG00000116514
RP1	ENSG00000236065
AK2	ENSG00000004455
ADC	ENSG00000142920
TRIM62	ENSG00000116525

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_00938	chr1:33230443-33234676	Adrenal_Gland
SE_00938	chr1:33235121-33238765	Adrenal_Gland
SE_24863	chr1:33235151-33236071	Colon_Crypt_3
SE_26629	chr1:33234999-33236986	Esophagus
SE_31442	chr1:33235107-33237093	Gastric
SE_34529	chr1:33234679-33236317	HCT-116

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I032769

chr1

33234864

33235830

Enhancer Sequence

GGAGGTCGAG GTGGGCGGGT CACGAGGTCA GGAGATCGAG ACCATCCTGG CTAACACGGT 60
GAATGAAACC CCGTCTCTAC TAAAAATACA AAAAATTAGC CTTGCCTGAT GGCGGGTGCC 120
TGTAGTCCCA GCTACTTGGG AGGCTGAGGC AGGAGAATGG CGTGAACCCA GGAGGTGGAG 180
CTTGCAGTGA GCCGAGATTG CACCACTGCA CTCCAGCCTG GTCGACAGTG TGAGACTCCA 240
TCTCAAAAAA AAAATAAAAA AAGAGTTAGA AAATCTTAAC TGTTGGAAGC CTGGTGTAAC 300
TAACTAGTGC CAGCTGTGTG ACCTTGGGAA AACCCTTAAC CTCTCTGAAC TTCTGTTTGA 360
TGTTCTATAA AAATGAGGAT AAGTACCCTA TTGGAATGAA TGCCAAATGT TTAGAATGAC 420
GACTAACACG TAATAATATG TTTACTAAAT AGTAAGCTAT CACTAAAGGG AAATTACCAT 480
CATTGACTTA GTAGCCTTAG TCTTACAGAA AGAAGCCTCT AGCTTTGTTT AACCTAGCCT 540
TGCCCATACC TACTTGACTG TGGAAACCAT TTCTCGCAGA GCTCTTATTA CAAAAGTAGT 600
GCCCTGCAGA ATGTGCCTGG AGTCCTTTGC TCTAACAGTT TTTCTCCCAC GACTGGCCCC 660