EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00723

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:28968320-28969160

Target genes

Number: 27
Name	Ensembl ID

EYA3	ENSG00000158161
RP5	ENSG00000228589
PTAFR	ENSG00000169403
DNAJC8	ENSG00000126698
ATPIF1	ENSG00000130770
SESN2	ENSG00000130766
MED18	ENSG00000130772
PHACTR4	ENSG00000204138
RP1	ENSG00000229820
U6atac	ENSG00000221216
RCC1	ENSG00000180198
SNHG3	ENSG00000242125
SNORA73A	ENSG00000201808
SNORA73B	ENSG00000200087
PRDX3P2	ENSG00000231468
TRNAU1AP	ENSG00000180098
SNORA61	ENSG00000207311
SNORA44	ENSG00000207314
SNORA16A	ENSG00000207070
SNHG12	ENSG00000197989
RAB42	ENSG00000188060
TAF12	ENSG00000120656
RP11	ENSG00000229388
RNU11	ENSG00000209804
GMEB1	ENSG00000162419
EPB41	ENSG00000159023
RP4	ENSG00000225616

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_40361

chr1:28968395-28971700

K562

Enhancer Sequence

AAAAAAATTC CCTCCTGAGT TTGAAGATAA AGCAAAGATT CTAGAAGCAT TTAAGGAACA 60
TTAACCAAGC ATCTCATTTG CTACGCACAG AAGGGTACTG TATTAAAATT ATGATCTAAC 120
TAACCATTGC CTCACTGTAA TCCTAAGCCT CTTTGAACCT TAGCCTTCTT AAATGTAAAA 180
TAGGAGTTTT TAAAAGATGA TCTTTTGGGA CTCTTCCATC ACTGACATTC TTTTATTTGA 240
GATGCAGAGA TCTGTGCTCA TTCAGGGTTG AGTGGAATGG GATTTAAAGC ACTTATCAAG 300
TACATAACTG AGTTCCAACT GTTTTCAACT TCACATCTGA TTCCCAAGAA TGAAGCAGAA 360
AATGAAGATG TTTGCATATG GGCTTCCTAG ATTGAGTATC TGACACAAGA AAAGCTTGCC 420
AAGAGCCAAG TAGGCAGTGC GAAGGAGAAG TTGTCTTCCC CTGAATACGT CCTTTATCTC 480
TCTGGGTTCA GGGAATACTG TGAAAAAATG GATCACTAAA TCTTTTCCAA ACCCTTTCCC 540
TTTACTTTGT AGGCTGATCT CATATCCATG GTCCCTTAGA TCCAAGGCTT TTAGGAGCTT 600
GGGTACTCAC AGCCCTGTTC CGAGACTCAG GAACTCGGAG TCTCAAAGCC CGGATCCCGT 660
CCCCAAAGAA GCCCCAGTCT TCACTGCCCG CTTCTGTTCC CTTCCAAACT CAAGTTTTCT 720
CTGTCTGCTT CTGCCCCTCA GGAACCTAAG TCTTCGCTGC CCCGTTTCTG AATCCTTAGG 780
AGCCCGGGTC TTCACTGTCC CGCTTCTGCC TCTTAGGAGC CCAAGTCCTC ACCGCTCCAC 840