EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00721

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:28921090-28922430

Target genes

Number: 29
Name	Ensembl ID

AL512288.1	ENSG00000240750
EYA3	ENSG00000158161
RP5	ENSG00000228589
PTAFR	ENSG00000169403
DNAJC8	ENSG00000126698
ATPIF1	ENSG00000130770
SESN2	ENSG00000130766
MED18	ENSG00000130772
PHACTR4	ENSG00000204138
RP1	ENSG00000229820
U6atac	ENSG00000221216
RCC1	ENSG00000180198
SNHG3	ENSG00000242125
SNORA73A	ENSG00000201808
SNORA73B	ENSG00000200087
PRDX3P2	ENSG00000231468
TRNAU1AP	ENSG00000180098
SNORA61	ENSG00000207311
SNORA44	ENSG00000207314
SNORA16A	ENSG00000207070
SNHG12	ENSG00000197989
RAB42	ENSG00000188060
TAF12	ENSG00000120656
RP11	ENSG00000229388
RNU11	ENSG00000209804
GMEB1	ENSG00000162419
YTHDF2	ENSG00000198492
EPB41	ENSG00000159023
RP4	ENSG00000225616

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1
Chromosome	Start	End

chr1

28921140

28921558

Enhancer Sequence

AAAAAAAAGA AAAGAAAAGA AAGGCCTGAG AGACCAGATG TGCAACTTCC TGTCCTTGAG 60
CCTCAGTGTC CCTATCTATC GATGGGGCTC ATAAAAGATC CCACCTTGAA GGGAGGTGGT 120
GACCACAAAT GAGACAGTGG ACAGGATGTG CTCACCCAGA GCCTGCCGCG CTGTGAATTG 180
AATGACAAAA GCTCTCATTC CCACTCCCTT TTTCTTGGCT GCGATGTGGC CACTCTGGCA 240
GCATTCCTGG GCTCAGACAC TGAGAAGCCA GCGTCAGGAA GCTGATGCAT GGGCAAAGGC 300
AGGTGCGGGG AATTCCAGGG GGAGCTTGGC TTGGAGGCTT CTTATGTCCT CAGGCTAAAA 360
TGATTCTGGG CATGGGATTA ATATGTGACG TCAAACCCAG GGTTGCTGGC CAATGCCCCC 420
CCGACCAGGC CCAGGGGCTG AAAAATGGAT GTTGGAGGCT GGGATGAACA TGAATGTGTA 480
GCAACTATGT TGGGCACACA GTGGCCACTG TGATGAGCCA CCAAGATCCC CCTTTCTGGC 540
TGGGGAACCC ATCAACCCTC TCCCCAGCTG CTGGAGTGCC ACTGGATGAT GGACTTCAGC 600
TTGCCCCACT CTCTGGGAAA GGCCCTCCCT TCAGGGCAGC TTGTATCCAA AGTTCATCTC 660
CTGGGGGGCC TTAAAGGACT CCCTCTTGCC CCAGCTCTGG ACAACTCTGA AAGTCAAAAC 720
CAACTTTATC AGTCTCTGTG GGCTTCATTG AGGACACTGT TGTGACATCA TAGCCAAGTT 780
ATCCCCTTGC CCAATCCTGC TTCCTTTTCT TCCCCAAACA GGTATCCATT TCAAGAATAT 840
CCCCTAATAA ACATCTGCAC ACTCATCTCC ATCTCAGAAT CTGCCTCCTG GTAACCTAAC 900
CTATGATGGG AACTGCTAGG CAGGGAATGT CCTGGGAGCA ATTAGGGAAG GCTTCATGGA 960
AGAGACACTG TTTATGTTAG GCCGAATCTC AGCAGGTGTA GGGCTTAGTG GGTATCATTG 1020
TGCTGTAGCA AAAAGCACAG CCACTTTGCT GGGTGCAGTG GCTCACGCCT GTAATCCCAG 1080
CACTTTCGGA GGCCTAGGCA GGCAGTTCAC TTGAGGTTGG GAGTTCGAGA CCAGTATGGC 1140
CAACACGGCG AAACCCTGTC TATACTAAAA ATACAAAAAT TAGCTGGGTG TGGTGGCTCA 1200
TGCCTGTAAT CCCAGCACTT AGGAGGCTGA AGCATGAGAA TTGCTTGAGC CCAGGAGGCA 1260
GAGGTTGCAG CGAGCCACGA TCCCGCCACT GCACTCCAGC CCTCTAACTT GGGTGGCAGA 1320
GCAACACTCC GTCTCATAAA 1340