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EnhancerAtlas 2.0
Tag
Content
EnhancerAtlas ID
HS129-00719
Organism
Homo sapiens
Tissue/cell
MCF10A
Coordinate
chr1:28899190-28899790
Target genes
Number: 29
Name
Ensembl ID
RPA2
ENSG00000117748
EYA3
ENSG00000158161
RP5
ENSG00000228589
PTAFR
ENSG00000169403
DNAJC8
ENSG00000126698
ATPIF1
ENSG00000130770
SESN2
ENSG00000130766
MED18
ENSG00000130772
PHACTR4
ENSG00000204138
RP1
ENSG00000229820
U6atac
ENSG00000221216
RCC1
ENSG00000180198
SNHG3
ENSG00000242125
SNORA73A
ENSG00000201808
SNORA73B
ENSG00000200087
PRDX3P2
ENSG00000231468
TRNAU1AP
ENSG00000180098
SNORA61
ENSG00000207311
SNORA44
ENSG00000207314
SNORA16A
ENSG00000207070
SNHG12
ENSG00000197989
RAB42
ENSG00000188060
TAF12
ENSG00000120656
RP11
ENSG00000229388
RNU11
ENSG00000209804
GMEB1
ENSG00000162419
YTHDF2
ENSG00000198492
EPB41
ENSG00000159023
RP4
ENSG00000225616
TF binding sites/motifs
Number: 2
TF
JASPAR ID
Coordinate
Motif Sequence
Strand
-Log10(p-value)
IRF1
MA0050.2
chr1:28899536-28899557
TTTTTCTTTTTCTTTTTTTTT
+
6.09
SREBF2
MA0596.1
chr1:28899492-28899502
ATCACCCCAT
-
6.02
HEDD
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1
Chromosome
Start
End
chr1
28899402
28899456
Enhancer Sequence
AATCCCAGCA CTTTGGGAGG CCGAGGCAGG TGGATTGTGA GGTCAGGAAA TCGAGACCAT 60
CCTGGCTAAC ACGGTGAAAC CCCGTCTCTA CTAAAAAATA GAAAAAATTA GCCGGGTGTG 120
GTGATGGGCG CCTGTAGTCC CAGCTACTCG GGAGGCTGAG GCAGGAGAAT GGCGTGAACC 180
CGGGAGGCAG AGCTTGCAGT GAGCCGAGAT CGCACCAATG GGCTCCAGCC TGGGAGACAG 240
AGCGAGACTC CGTCTCAAAA AAAAAGAAAA AGAAAATATA GTAAAGTATA ATGAAACTGA 300
AAATCACCCC ATATCCTATT ACAACATAGT AATAGCCATT ATTAATTTTT TCTTTTTCTT 360
TTTTTTTTTT TTTTGAGGCA GAGTCTTGCT GTGTCACCCA GACTGGAATG CAGTGGCGCA 420
ATCTCATCTC ACTGCAAGCC CGCCTCCCGG GTGCAAGTGA TTCTCCTGCC TCAGCCTCCC 480
GAAGAGCTGG GATTTCAGGC ACATGCCACC ACGCCCAGCT AATTTTTGTA TTCTTAGTAG 540
AGACGGGGTT TCACCATCTT GGCCAGGCTA GTCTCAAACT CGACCTCGTG ATCCGCCTGC 600