Tag | Content |
---|
EnhancerAtlas ID | HS129-00688 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:27928170-27929900 |
Target genes | Number: 29 | Name | Ensembl ID |
|
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
ZNF263 | MA0528.1 | chr1:27929671-27929692 | CCCTCCCCGTCCACCTCCCCC | - | 6.38 | ZNF263 | MA0528.1 | chr1:27929677-27929698 | CCGTCCACCTCCCCCTCCCCC | - | 6.4 | ZNF263 | MA0528.1 | chr1:27928772-27928793 | CCCCGCTTCTCTCCCTCCTCC | - | 6 | ZNF263 | MA0528.1 | chr1:27929558-27929579 | GAGGGAGGGGGAAGGAGGAGG | + | 7.09 | ZNF263 | MA0528.1 | chr1:27929668-27929689 | CCCCCCTCCCCGTCCACCTCC | - | 7.62 | ZNF740 | MA0753.2 | chr1:27929498-27929511 | CCCCCCCCCCCAC | + | 6.92 | Znf423 | MA0116.1 | chr1:27928528-27928543 | GCCCCCCAAGGGTCC | - | 6.25 | Znf423 | MA0116.1 | chr1:27928528-27928543 | GCCCCCCAAGGGTCC | + | 6.48 |
|
| Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
SE_00527 | chr1:27924540-27931302 | Adipose_Nuclei | SE_00861 | chr1:27914193-27931151 | Adrenal_Gland | SE_01588 | chr1:27924188-27929667 | Aorta | SE_03939 | chr1:27919012-27929651 | Brain_Anterior_Caudate | SE_05478 | chr1:27923898-27929632 | Brain_Cingulate_Gyrus | SE_05814 | chr1:27923258-27933300 | Brain_Hippocampus_Middle | SE_07770 | chr1:27919197-27930846 | Brain_Inferior_Temporal_Lobe | SE_11718 | chr1:27926513-27931248 | CD20 | SE_20210 | chr1:27927742-27929451 | CD56 | SE_25377 | chr1:27923108-27931282 | DND41 | SE_26518 | chr1:27909071-27932559 | Esophagus | SE_27625 | chr1:27927836-27929612 | Fetal_Intestine | SE_28547 | chr1:27927989-27931064 | Fetal_Intestine_Large | SE_29557 | chr1:27923567-27931291 | Fetal_Muscle | SE_31394 | chr1:27927680-27931134 | Gastric | SE_33503 | chr1:27922582-27931429 | H2171 | SE_40593 | chr1:27913008-27932820 | Left_Ventricle | SE_42106 | chr1:27919078-27932390 | Lung | SE_48058 | chr1:27919076-27931233 | Psoas_Muscle | SE_51091 | chr1:27923780-27931307 | Skeletal_Muscle | SE_54056 | chr1:27911548-27931728 | Spleen | SE_54527 | chr1:27922429-27929632 | Stomach_Smooth_Muscle | SE_62470 | chr1:27916580-27996594 | Tonsil | SE_65253 | chr1:27922257-27931723 | Pancreatic_islets | SE_68682 | chr1:27928519-27931938 | H9 |
|
Enhancer Sequence | CAGCATGCAC ATGCCACCTG GGGGGTCCCC CCACAACCCA GCCTTCCTAC CCCCCCACCC 60 CAGGTTGGGG GACAGACTGG TAATCTTTCA CTTACAGCCC CAGCTCACAC AGCCACACAG 120 AACAGGAACA AGCCAACAAT AGAAACACCC CAAATGCCCC TGGCAGGACT CTGCCCAGGC 180 CCGGGCACAT GCCCCCGCCC AGCCGGCGGC GACAGCAGCA GCGGACAAAA TGTGGCCACC 240 CTGACCCGGA GGCAAAGCTT GTCCTCACAC CCTGAGCTCT GCCCAGGGAG CTGGGGCCAA 300 GTCCCGCCTG ACACCAACTG GTCCGGCGGG AAACGCCTGC CCAGCCAGAC AGGCACAGGC 360 CCCCCAAGGG TCCCTCCTTG TGCTCAGGGA CCAGGCTGGT ACAGTCCGGC CCTGCCTCCC 420 AGGGTGACGC CTGGGCCCAA ATTCAGCTGG CCCTGCCAGT CAGGCACTGG TGCAGAACCG 480 AGGGCACCAG GCTCAGCCCC TCCCAGCCCA GCCCCAGGGC CCCCAAGCTG GGAGGGAGGG 540 GAGACTCCCC ACCCCTCCAC ATCTGGCCCT GGCCCCCAGG GTCTGCGGTA GAGAATTCCC 600 GCCCCCGCTT CTCTCCCTCC TCCCGCTCTG TGCCCGCTGC CCGCCTCAGG GACAGCCCCA 660 GCTCCCGCCT CCGGCCAGCA AGGCCCACAT CCTTCCTCCC TCAGCTGGCC CCTTCGCCTG 720 GCAGGAGGCT GGGGGGTCAG GCTGCTGGGG AACCCCCCCA AGCTCCCATC AGTCCTCATC 780 CCCAGCCCCC AAACTCTGGG TTGCTGTCCC TTTTCCTGTA GAACAGGAAA CAAGGTTATT 840 TCCTAGACTC AGAGCCAGCC CCCTGCCCCT CTGGCTCTGC CCGGGGACCC AGACCCAGCA 900 GGGGAAGGCG CCCTCAAGCA GCGAGCAGAG ATTCAGCAAT TCACCCCAGC TCCCTGCCTA 960 GGGGGCTGAC AGCTGTCACT CAGCACCCCA CCCCCTGGGG AAGAGGGGGC CGATTCAATC 1020 AGAGCCCCAG AGGAAACGCA TTGATAGGCG ATTATTTATT TATTTATGCA AAAGTGAGCC 1080 GACTTTGTTC GCCAGGTAAC CGGGCACGCG GCCCAACCCC TCCAGCCCTA GCCGCCCCCA 1140 AATCCCTCCT CCGCCCCACA CCCCCTCCGG GTCATTAGGT CCCCGCCCCT CAACTCCCCG 1200 AGAGCCAGTG GATCCTAGGG ATTTGGGGGT TGGAGGGGAG GGGCTCCTCC CTCCGCAGTC 1260 TCCCCTTTTC CCAGCGCCGA TCCTAAAATC CAGCCTTGTT CTCCGCTCCC ACGGTCCCCC 1320 CTTCATTCCC CCCCCCCCCA CATTCTCAGC AAGCTGGAGA GCAAATTGCA GTTTTAAATC 1380 CAAAGGCGGA GGGAGGGGGA AGGAGGAGGG GGCGCGCGGC AGCGCTGGGC GCGCACCTCG 1440 CCCCCGAGCC GGGGGAGCCG CGGGGCGGCC AGGAAACCCG AGAACCCCCC CTCCCCGCCC 1500 CCCCTCCCCG TCCACCTCCC CCTCCCCCTT CCCGGCGCTG CCTGCCAGGC TTCGAGCCGA 1560 GCCCAGCCGA GCCGCGGGCC CCGGTGGAAA CAAAGACCGA TCGCACCGCG GGCACCGCAG 1620 CCACCGGGTC CAGCGGACCG GACCGGGGGA CGCAGGCCCC CCCCGTGCGC TGCACAAAAG 1680 AGCCTGGCCG GCCGGTCCCC AGCGGGGGTC TGGGGCTGGG GAGGAGGCGC 1730
|