EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00621

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:26130770-26131180

Target genes

Number: 19
Name	Ensembl ID

SYF2	ENSG00000117614
SDHDP6	ENSG00000224183
TMEM50A	ENSG00000183726
SDHDP1	ENSG00000238084
TMEM57	ENSG00000204178
LDLRAP1	ENSG00000157978
SEPN1	ENSG00000162430
RP1	ENSG00000255054
FAM54B	ENSG00000117640
AL020996.1	ENSG00000223474
C1orf135	ENSG00000127423
STMN1	ENSG00000117632
PAFAH2	ENSG00000158006
EXTL1	ENSG00000158008
PDIK1L	ENSG00000175087
ZNF593	ENSG00000142684
RP11	ENSG00000236782
CNKSR1	ENSG00000142675
UBXN11	ENSG00000158062

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF740	MA0753.2	chr1:26131135-26131148	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr1:26131132-26131145	CCGCCCCCCCCCC	+	6.64

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I025804

chr1

26130693

26131696

Enhancer Sequence

AGTTTAAAGG CATCCTGGGT GATTTTGAGG ACTTCTGGTT GAGAACTGCT TTAATGCATC 60
ATTCAGCCTG CTAGCCAGTC AGTCAGCAAA TGCCAGGCAT CATCTCTGTA CCACTACCCT 120
GCCCTGAGAG GGCAGACAGG GCAAGACCCA CCCCCGCCCT CCGCTGGCTA CACTTTGTTA 180
CTGGTGACTA TTACTCACCC CTTTTGAAAT AGGCGTCATT TGTCCCTTAG CCTTTCAAAA 240
TGAATCCTTC TATACTGGGA AGGTTATAGA CTTGCCAGAT CTCTGAGCAG GAAAAGATCC 300
AAGAAATCAA ATCCAGCCAC ACTGCCAGTC CAGCCCCTCC TACAGCTGGG GCAATGCCCC 360
CCCCGCCCCC CCCCCCCCGC CGCAAAAAAA AAAAAAGCAG GGGAAAGTGG 410