EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00438

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:17615670-17617030

Target genes

Number: 15
Name	Ensembl ID

NBPF1	ENSG00000219481
CROCCP2	ENSG00000215908
EIF1AP1	ENSG00000236698
RNU1	ENSG00000207389
RP11	ENSG00000230239
CROCC	ENSG00000058453
RP1	ENSG00000226526
ATP13A2	ENSG00000159363
SDHB	ENSG00000117118
PADI2	ENSG00000117115
PADI1	ENSG00000142623
PADI3	ENSG00000142619
PADI4	ENSG00000159339
RCC2	ENSG00000179051
ARHGEF10L	ENSG00000074964

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

INSM1	MA0155.1	chr1:17616107-17616119	TGTCAGGGGGCA	+	6.92
RREB1	MA0073.1	chr1:17616179-17616199	CCGGTGTGGGTGCTTGGTGG	-	6.39

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I017289

chr1

17615819

17616738

Enhancer Sequence

TTAGTCGGGC GTGGTGGCTC ATGCCTGTAG TCCCAGCTAC TCAGGAGGCT GAGGCAGGAG 60
AATGGTGTGA ACCCAGGAGG CGGAGCTTGC AGCGAGCTGA GATCGCGCCA CTGCACTCCA 120
GCCTGGGTGA CAGAGTGAGA CTCCATCTAA AAAAACAAAA CCAAACAAAA GCCTGGCTAC 180
AGCAAAGCTT TGGTAACAAA GCAGGTACGT GTATCCCCCA TTTGCCCACC ATGATGGGCC 240
AGTGGCCACT CCCCCAGGAC TCACAGATGA GTCAAAGCAG TGGGCAAGTT TTTTCGAGGC 300
TTCGGGCAAG AAAAGGGCTG GGATCCCTCT TCCCCCAAGT GCTTCCCCCC AGTTCTGGGC 360
CCCACGCCTG GGTCTCCTGG TTCACAGCAT TTTATTGTTA TGTTGGTGGT GAGGATTTGA 420
GATGGTTCCT GATAGGATGT CAGGGGGCAA GGGTCTCCTT CCGAGTTCCT GGAAAGGAAT 480
GCACACTCAG AAACCCAGGC TGAACGTTGC CGGTGTGGGT GCTTGGTGGA TGTGTCTGTC 540
CTGGACCAGC AGATGGAAAC TAACTACCGC TCAGCTGGCT CTCTGAAGCA ATGCTGTCTT 600
TCAAGAGCTG GAAGCCAGCA CCAAAGCTAG CTCCATAGTT TCTTTTTTGA ACTCTTCTTG 660
GGTCTTTAAA TAAGTCTTGG CATTCTGAGA AACTGCATCT CAATGCCAAT TATCTTAACT 720
CAAAACATCT CAATCACAGA AATTATAGCT GCCTTGGGCA GTTTCCAGTG CTCCAGCAAG 780
CAGGGACCTG AGCAGGGCTG GGCAGGGCAT CATTCAGAAG TGTTTATGTG ACTAACGCTC 840
CCCAGGAGTC TACTGGACAG CTCAATCAGC ACATTTACTT ACTGGTGTTT TTTTTTTTTT 900
TAATTCCTTT GCCAAATTCC TCTAGGGATT TGAGGCAACA TATATTAAGA GTACATTCAA 960
CAAACTGATG ATTTAAAAAA ATTTTTTACA TTAAGACACC AAGGCCAGAC ACGGTGGCTC 1020
ATGCCTGTAA GCCCAGCACC TTGGGAGGCT AAGGCAGGTG GATCAGTTAA GGTCAGGAGT 1080
TTGAGACGGG CCTGGCAAAC ATGGTGAAAC CCCATTCTAC TAAAAATACA AAAATTAGCC 1140
GGGTGTGGTG GCGGGCGCCT GTAATCCCAG CTATTCAGGA GGCTGAGGCA GGAGAATCGC 1200
TGAAACCCAG GATAGGTTAT CTTGAAATAA TAATAATAAT AATAATAATA CACCAAAACA 1260
GAAAAAAAAA TCCAGAAAAT AAAACCCATG GAAAAGGACA AACAAATATA TGACCATGAG 1320
AACCAAACTA TCATTAGGAT TGGAGCTTCC CAGTAGCCCT 1360