EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00422

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:17330270-17330820

Target genes

Number: 16
Name	Ensembl ID

C1orf144	ENSG00000055070
RP11	ENSG00000226457
NECAP2	ENSG00000157191
EIF1AP1	ENSG00000236698
RNU1	ENSG00000207389
MST1P9	ENSG00000186715
CROCC	ENSG00000058453
RP1	ENSG00000226526
MFAP2	ENSG00000117122
ATP13A2	ENSG00000159363
SDHB	ENSG00000117118
PADI1	ENSG00000142623
PADI3	ENSG00000142619
PADI4	ENSG00000159339
PADI6	ENSG00000256049
RCC2	ENSG00000179051

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)

MA0728.1

chr1:17330377-17330392

TGAACTCCTGACCTC

6.22

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I017003

chr1

17330121

17331087

Enhancer Sequence

GCCTCAGCCT CCCAAGTAGC TGGGATTACA GGCACATGCC ATCACGCCCA GCTAATTTTT 60
GTGTTTTTAG TAGAGATGGG GTTTCAGCAT CTTGGCCAGG CTGATCTTGA ACTCCTGACC 120
TCGTGATCCA CCTGTCTTGG CTTCCCAAAG TGCTGGGATT ACAGGGGTGA GCCACCGCAC 180
CCAGCCTGAG CTCATGTTTC TTAAGCCTTT TGTAGGTGGC AGAGCAGTGA CTAAACCCCA 240
AGCAGACAGT CTGAGTACAG AGCTGATAGT CTGATTCACA GTGGTGTCAC AACCTCAGAT 300
CACATTCGGT GCCAAGCTCT ACATAAATTA TTATCTATTT CACCATCAAA ACAATCCTAG 360
GAGGCAGAAG TTATCTTCAT GCCCTATTTA TAGACAGAGA TCCCAGGCCT GGAGGGGCTC 420
AGTAACCTGC CCAAGGTTTC AGACAGCAAA AGCATCAGAG CTGAGAGGGG AGCCCAGGCC 480
ATGCCATGCC ACCGTCTGTG CCCAAACCAG TGCCACTCTG GGAGGTGACA TGAGCCACAC 540
AGGCCCTGAC 550