EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00181

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:8249570-8250330

Target genes

Number: 5
Name	Ensembl ID

VAMP3	ENSG00000049245
PER3	ENSG00000049246
PARK7	ENSG00000116288
ERRFI1	ENSG00000116285
CTA	ENSG00000232848

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_02150	chr1:8249476-8250564	Aorta
SE_33918	chr1:8249611-8250575	HCC1954
SE_34231	chr1:8248874-8265404	HCT-116
SE_34786	chr1:8249361-8250554	HeLa
SE_47106	chr1:8248276-8251179	Panc1
SE_54787	chr1:8249345-8250446	Stomach_Smooth_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I008188

chr1

8248990

8250662

Enhancer Sequence

AAAAGAAAGA AAAAAGAAAT CACACTGCTT AGGGAAGATT TGGGGCCCAC ATGCATTGAT 60
CAATCTAAAG ACATGTGGAG AGTTCAGGTT ATTTTCCAGG CACTGTGTTA GGCAGTGGGA 120
ACAAATGAGC AAGTGGGAGC TATCCCTCGT CAGAGCCCCT GCCCCAGCCA TGGGCACCCC 180
ACAGGCCTAG GGCCCAGCCA TACCAAAATA TCAGAGACCT AAAAAATTGT AGTGTGATTA 240
TTTTCTATTA AGTGTTTACT TAATAGAAAA ACAACAACAA AAAACATCGC AGCTCTCCTG 300
GCAAGATGGT GAAGGGGCAA GGCTGGAGTG ACTCAGGGGC ATCTTTCTCA CCAGGACCTC 360
ACCACGTTGG AAATTGAGGT CCACCAACTT GCCTCCACTT TTTCACGAAG CCATCAGCAG 420
ACAAGCCATG ATGAACTGGG CATGCTCATG GAAAATCCAC AGCTGTGAAA GCTATTTCTG 480
GAGTTCACAC TGTCAAGTTC AAAAATGAAC TGGAAACAAC CACAGAATCC ACCTTGGGTA 540
GGCTGAGGCC AACATTTATA AATCTGATGA CTCAAGTTGT CCTTGGCCAG AATGTGCTGC 600
ACCCTGTGGA AGCAGGACAC CTGATGCCTT TCCTACATGC ATTCCAGGGA CCTAAGGGAA 660
CTTCAAACAA GTCAGAGGTG TTGCGTTTGT TGACTGTCCT GGCCGTGATG TTTTGAGCTA 720
CTATGCTAAC AGGGCCGCAT TGACAGATGC TGCTCTTCGT 760