Tag | Content |
---|
EnhancerAtlas ID | HS129-00166 |
Organism | Homo sapiens |
Tissue/cell | MCF10A |
Coordinate | chr1:8100490-8101450 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr1:8101175-8101196 | TCTTTCTTTCTTTTTTTGTTT | + | 6.13 |
|
| Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
SE_01874 | chr1:8099666-8101052 | Aorta | SE_26425 | chr1:8099767-8101609 | Duodenum_Smooth_Muscle | SE_33765 | chr1:8099879-8101573 | HCC1954 | SE_34231 | chr1:8099554-8102426 | HCT-116 | SE_34846 | chr1:8099891-8101213 | HeLa | SE_36931 | chr1:8099699-8101977 | HSMMtube | SE_45858 | chr1:8099933-8101698 | Osteoblasts | SE_47106 | chr1:8099395-8101831 | Panc1 | SE_51696 | chr1:8100193-8101440 | Skeletal_Muscle_Myoblast | SE_52775 | chr1:8100403-8100987 | Small_Intestine | SE_54897 | chr1:8099700-8101657 | Stomach_Smooth_Muscle | SE_55872 | chr1:8098984-8102769 | u87 | SE_63484 | chr1:8100182-8101259 | HSMM | SE_67534 | chr1:8098984-8102769 | u87 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I008039 | chr1 | 8099908 | 8101624 |
|
Enhancer Sequence | CTTACCAGTG CATCTCTCCT GGATATTTGT TGCAGACTGG CTTCTTGGCA AGCAGTCTTT 60 GAGATGGAGA TGAACATGGA GGACATTTAT TAGAGTGTTG AAGGAAGGGT GAGGAAAAAG 120 AATTGGGCAG AGGGAGAAGT TAAGTTGTGA TCCATGTACG ACATAGGCCT TAGCTAACTA 180 CATGCAAAGC TCTGGAACAG GATTGACCCT TTGGAGTTGT CCTAACTTGG GCAAGAGAGC 240 TGGACCTTTT TTCCTCTAAC TCTTATTGGT CAGTCATTGA TATGGCTTGC CTTTGGAAGG 300 AAGAGTAAGC TTGGAAAAGG CAGTTTTCTT CAGCTGAGTC ACTCTCCAAA CAGGGTTGAC 360 AGCTAAGGGC CATGTTCTGG CAGCATTCCC AGGAGCTTGA GGAATAAGGC TTTTCATAAC 420 TCATTGGGGA TCTGGGTAGC TCATCATGGA AACTTCCTTT TGTTCTCTCT GTTGTTAGTT 480 TATCCTTCCT CACTCCATTT TCCTAGTAGT TTTGTTGATG TTTCTACTTT GATATTTTGA 540 GGCTATATTA TTCAGAGCAT ACATGTTTAG AATTGTTAAA TCTGTCTGAT AAATCCAACA 600 TTTTGTTAAT TTGTAGTAAG CCTCTATCTC TAGTAATAAT TTTTGCATTA AAGTCTATTT 660 TGTTTGATAC TTCTTTTCTT TACTTTCTTT CTTTCTTTTT TTGTTTTGTC TTGTTTTGTT 720 TTGGGACAAA GTCTCACTCT GTGGCTTAGG CTGGACTGCA GTGGCATGAT CTTAGCTCAC 780 TGTAACCTAT ACCTCCTGGG TTTAAGCGAT TCTTGTGTCT CAGCCATCTG AGTATCTGGG 840 ATTACAGGTG TGTGCCACCA TGCCCAGCTA ATTTTTTGTA TTTTTAGTAG AGACAGAGTT 900 TTGCCATGTT GGCCAGGCTG GTCTCAAACT CCTGGTCTTG AGTGATCTGC TTGCCTCAGC 960
|