EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS129-00143

Organism

Homo sapiens

Tissue/cell

MCF10A

Coordinate

chr1:6803020-6804600

Target genes

Number: 10
Name	Ensembl ID

RPL22	ENSG00000116251
ICMT	ENSG00000116237
ACOT7	ENSG00000097021
HES2	ENSG00000069812
PLEKHG5	ENSG00000171680
RP11	ENSG00000229519
NOL9	ENSG00000162408
ZBTB48	ENSG00000204859
PHF13	ENSG00000116273
KLHL21	ENSG00000162413

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3	MA0135.1	chr1:6804274-6804287	TGTTAATTAATTT	-	6.19
Nr2f6(var.2)	MA0728.1	chr1:6804514-6804529	TGAACTCCTGACCTC	-	6.22
TBX21	MA0690.1	chr1:6803921-6803931	AAGGTGTGAA	+	6.02
TBX2	MA0688.1	chr1:6803921-6803932	AAGGTGTGAAA	+	6.62
ZNF263	MA0528.1	chr1:6803612-6803633	TCCTCTTCTTCTGCCACCTCC	-	6.45

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I006743

chr1

6803061

6804630

Enhancer Sequence

TTCCACATTT TTCTGCCTGC TTACTTTCTA GCCGAGCTGG CAGCTGATTA GATGGTGCCC 60
ACCCAGATTA AGGGTGGGTC TGCCTTTCCC AGCCCACTGA CTCAAACGTT AATCTCCTTT 120
GGCAACACCC TCACGGACAC ACCCAGGATC CATACTCTGT ATCCTTCAAT CAAGTTGACA 180
CTCAGTCTCA ACCATCACAA CACCTGATGC AAAGTCACAG GCCGTTGGCT TTCATGCCCA 240
CCTGTATGGT AAGGCCAGGA TTCAGAAAAT GTTCCTCAGT CCCCAAACCA GGACCTCACC 300
ACACCCGAGT CACCACTGCC AACCCCCAAC TCCCATCCCT ATTTGCCCTC TGTGCCTGGC 360
GGGGGGTTGG GGGAGTTTGT TTTGTTCCTC AAAATGTGGT CCATGGGCCA GCTGCGTCGG 420
CATACCTGGG CACTTGTTGG AAAGGCGGGA TCTCGGCCCC ACCCTAGATC AGCTTAATCA 480
GAATCTGCAT TGTAACCAGA GCCCCCTCAG TGAGTCACGT GCACAGTGGA GTTTAAGAAG 540
CTCCTCCCTC CAGGACCCTG CTCCACCTGG GCTGTCTTCT CACACCTATT TCTCCTCTTC 600
TTCTGCCACC TCCGCAGGTG TCTCGGCTTG GATTCCTGCA GCTCGGGAGG ACACATTAGG 660
GAAATGTCTA TGATGCTCTT TCTGCCTTAG CTTGTTAGAG TTGGCAGCAG AAGAGGCCCC 720
TCCTGGTAGC GCTCGGCTGG GCCCTGCAGC TGGCTGGGGG AGGCCTCTCT GTGGCCACAC 780
GCCTGAGGTC TGGGCTGGTT CCCCTTGCTG CTGCCTCTCT CCTGGGTGGA CAGTGGTCTA 840
GAGCTGTGCT GGGGGCCCCG TCCTTCCTCC TATGCACCAG GCTCAGCGAG AGGCAAAGGC 900
GAAGGTGTGA AATGACTTTG ACCTTGGTGT TTAGGCAGAT CCCTCTCACT CTGAAAGTGC 960
TTCAACATGT TGGCCTGGTA CGTTCCGAGC ACTGTGGAGT TTTGGCAGAG TGGCCGATAA 1020
GTATTTTTAG TTCCTTCCTC CTTAATGTTT GCCAGAAAAC CACAGTCATT ACTCATGAGG 1080
AGGAGAAGTT TCCTCCCTCC CAGGCTCCAG AAGAGTCCGG GCTTGCCCTC AGATGCCCAC 1140
TGAGCTGCCC CTGCCTGGGC TTCTAAGCTG TCTTTGAAAT CAACATAATG CTAACACCTA 1200
CAATAAAGCA GGATACCATA TATTTTTTAA TAGACTAAGA CCTGAGCTTT TTTTTGTTAA 1260
TTAATTTGGT GTTTTTTTTT TTTTTTTTTT TTTGAGATGG AGTCTTGCTC TGTTACCAGG 1320
CTGGAGTGCA GTGATGCGAT CTCAGCTCAC TGCAACCTCC ACCTCCTGGG TTTAAGCAAT 1380
TCTCCTGCCT CAGCTTCCCG AGTAGCTGGG ACTACAGACG CGAACCACCA TGCCCAGCTA 1440
ATTTTTTGTA TTTTTAGTAG AGATGGGGTT TCACCATGTT GGCCAAGCTG GTCTTGAACT 1500
CCTGACCTCA GGTGATCTGC CCACCTCGGC CTCTCAAAGT GCTAGGATTA CAGGCATGAG 1560
CCACCGCACC CGGCCTTTTT 1580